Job Description P07395 Confidence 99.69% Date Thu Jan 5 11:00:19 GMT 2012 Rank 32 Aligned Residues 210 % Identity 20% Template c2du7C_ PDB info PDB header:ligase Chain: C: PDB Molecule:o-phosphoseryl-trna synthetase; PDBTitle: crystal structure of methanococcus jannacshii o-phosphoseryl-trna2 synthetase Resolution 3.60 Å

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		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.								.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		Y	N	N	I	P	D	E	P	V	Q	A	S	L	I	M	G	T	H	R	E	A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	.	.	.	.	.	.	.	M	I	H	P	G	V	E	A	L	L	L	P	S	P	I	S	V	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		D	K	H	I	D	N	K	Y	P	R	L	K	P	V	Y	G	K	P	H	P	V	M	E	T	I	E	R	L	R	Q	A	Y	L	R	M	G	F	E	E	M	I	N	P	V	I	V	D	E	M	E	I	Y	K	Q	F	G	P	E	A	M	A	V	L	D	R	C	F	Y	L	A	G	L	P	R	P	D	V	G	L	G
Template Known Secondary structure				T	T	T	T	S	S	S	S	S																							T	T	T								S											T		T	T					G	G	G													S	S	S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
																																																																										540	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	S	A	M	R	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	K	V	E	I	I	K	N	L	G	I	D	I	D	E	E	K	K	E	R	L	R	E	V	L	H	L	Y	K	K	G	A	I	D	G	D	D	L	V	F	E	I	A	K	A	L	N	V	S	N	E	M	G	L	K	V	L	E	T	A	F	P	E	F	K	D	L	K	P	E	S	T	T	L	T	L	R	S	H
Template Known Secondary structure		S	T	T	S			S	S		S					S				S	S	S				S				S	S	S	S				S	S	S			S				S	S	S	S			S		S				S	S	S	S	S		T	T	S	S	S												S	T
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580		.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	.	Q	A	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D
Query Conservation																																			.
Alig confidence																																			.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	S	G	W	F	I	T	L	S	S	L	I	K	K	R	K	L	P	L	K	L	F	S	I	D	R	C	F	R	R	E	Q	R	E	D	R	S	H	L	M	S	Y	H	S	A	S	C	V	V	V	G	.	.	.	.	.	.	.	.	.	.	.	E	D	V	S	V	D	D	G	K	V	V	A	E	G	L	L	A
Template Known Secondary structure		T										T	T	T	T	T	S		S	S														S	S		S	S	S			S												.	.	.	.	.	.	.	.	.	.	.	T	T															G
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250												.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		627	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.							.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
Predicted Secondary structure						.																									.	.	.	.	.	.
Query SS confidence						.																									.	.	.	.	.	.
Query Sequence		L	T	G	K	.	L	N	E	V	E	F	R	A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I	Y	L	.	.	.	.	.	.	K	G	E	R	I	G	F	V	G	V	V	H	P	E	L	E	R	K	L	D	L	N	G	R	T	L	V	F	E	L	E	W	N	K	L	A	D
Query Conservation						.																									.	.	.	.	.	.
Alig confidence						.																									.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	G	F	T	K	F	K	F	K	P	D	E	K	K	S	K	Y	Y	T	P	E	T	Q	T	E	V	Y	A	Y	H	P	K	L	G	E	W	I	E	V	A	T	F	G	V	Y	S	P	I	A	L	A	K	Y	N	I	D	V	P	V	M	N	L	G	L	G	V	E	R	L	A	M
Template Known Secondary structure		G	G	T										T	T			T	T	B		T	T	T									S	S	S	S		S									B								T	T			S								B
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions