Job Description P07395 Confidence 99.74% Date Thu Jan 5 11:00:19 GMT 2012 Rank 30 Aligned Residues 209 % Identity 14% Template c2du4B_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:o-phosphoseryl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys Resolution 2.80 Å

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		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.						.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure																																																			.								.	.	.	.	.															.	.	.	.
Query SS confidence																																																			.								.	.	.	.	.															.	.	.	.
Query Sequence		N	N	I	P	D	E	P	V	Q	A	S	L	I	M	G	T	H	R	E	A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	.	Q	Q	M	I	H	P	G	.	.	.	.	.	V	E	A	L	L	L	P	S	P	I	S	V	E	M	.	.	.	.
Query Conservation																																																			.								.	.	.	.	.															.	.	.	.
Alig confidence																																																			.								.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		R	S	P	N	E	L	Y	P	R	V	G	F	S	F	G	K	E	H	P	L	F	A	T	I	Q	R	L	R	E	A	Y	L	S	I	G	F	S	E	V	V	N	P	L	I	V	E	D	V	H	V	K	K	Q	F	G	R	E	A	L	A	V	L	D	R	C	F	Y	L	A	T	L	P	K	P	N	L	K	P	I	S
Template Known Secondary structure				G	G	G	S	T	T	S	S																							T	T	T												T								T	T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
				542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.		.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																									.
Query SS confidence		.	.																																									.
Query Sequence		.	.	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	.	A	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K
Query Conservation		.	.																																									.
Alig confidence		.	.																																									.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	L	T	L	R	S	H	M	T	T	G	W	F	I	T	L	S	H	I	A	D	K	L	P	L	P	I	K	L	F	S	I	D	R	C	F	R	R	E	Q	G	E	D	A	T	R	L	Y	T	Y	F	S	A	S	C	V	L	V	D	.	.	.	.	.	.	.	.	.	.	.	E	E	L	S	V	D	D	G	K
Template Known Secondary structure								S	S	T									T	T	T	T	T	T	S		S															T	T		T	T	T			S												.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.												.	240	.	.	.	.	.	.	.
		619	620	.	.	.	.	.	.	.	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.										660	.	.						.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure														.																														.	.	.	.	.	.	.	.	.				.	.	.	.	.
Query SS confidence														.																														.	.	.	.	.	.	.	.	.				.	.	.	.	.
Query Sequence		G	D	L	E	S	V	L	D	L	T	G	K	.	L	N	E	V	E	F	R	A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I	Y	L	K	G	E	R	I	.	.	.	.	.	.	.	.	.	G	F	V	.	.	.	.	.	G	V	V	H	P	E	L	E	R	K	L	D	L	N	G	R	T	L	V	F	E
Query Conservation														.																														.	.	.	.	.	.	.	.	.				.	.	.	.	.
Alig confidence														.																														.	.	.	.	.	.	.	.	.				.	.	.	.	.
Template Conservation
Template Sequence		A	V	A	E	A	L	L	R	Q	F	G	F	E	N	F	R	F	R	K	D	E	K	R	S	K	Y	Y	I	P	D	T	Q	T	E	V	F	A	F	H	P	K	L	V	G	S	S	T	K	Y	S	D	G	W	I	E	I	A	T	F	G	I	Y	S	P	T	A	L	A	E	Y	D	I	P	Y	P	V	M	N	L	G
Template Known Secondary structure										T	T	T										T	T			T	T	B		T	T	T													T		S	S	T	T	T												B							T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		684	.	.	.	.	.	690	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	W	N	K	L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	V	E	R	L	A	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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