Job Description P07395 Confidence 96.26% Date Thu Jan 5 11:00:19 GMT 2012 Rank 59 Aligned Residues 155 % Identity 14% Template c2dq3A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of aq_298 Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	G	V	E	A	L	L	L	P	S	P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N	.	R	V	R	I
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		E	R	A	L	I	N	F	X	L	D	L	H	T	K	K	G	Y	K	E	I	C	P	P	H	L	V	K	P	E	I	L	I	G	T	G	Q	L	P	K	F	E	E	D	L	Y	K	C	E	R	D	N	L	Y	L	I	P	T	A	E	V	P	L	T	N	L	Y	R	E	E	I	L	K	E	E	N	L	P	I	Y	L
Template Known Secondary structure																T	T								S											S		T	T	T	T	G	G	G	S		B		T	T	T						S	S	T						G	G	G	T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		570	.	.	.	.	.	.	.	.	.	580	.	.								.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		F	E	S	G	L	R	F	V	P	D	T	Q	A	.	.	.	.	.	.	.	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	E	V	E	F	R	A	E	A	N	P
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		T	A	Y	T	P	C	Y	R	R	E	A	G	A	Y	G	K	D	I	R	G	I	I	R	Q	H	Q	F	D	K	V	E	L	V	K	I	V	H	P	D	.	.	.	.	.	.	.	T	S	Y	D	E	L	E	K	L	V	K	D	A	E	E	V	L	Q	L	L	G	L	P	Y	R	V	V	E	L	C	T	G	D	L
Template Known Secondary structure													S			S	S	S		S	S	S	S	S		S													G	G	.	.	.	.	.	.	.	G																				T										T	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.								.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		643	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	H	P	G	Q	S	A	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	S	A	A	K	T	Y	D	I
Template Known Secondary structure			T	T		S
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions