|   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | V | D | G | V | E | P | V | A | G | S | F | H | G | V | V | V | G | E | V | V | E | C | A | Q | H | P | N | A | D | K | L | R | V | T | K | V | N | V | G | G | D | R | L | L | D | I | V | C | G | A | P | N | C | R | Q | G | L | R | V | A | V | A | T | I | G | A | V | L | P | G | D | F | K | I | K | A | A | K |
Query Conservation |   |
  |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |
|
|   |
|
|
|
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |
|   |   |
| . | . |
|
|   |
|
|   |
|   |   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |
|
|   |
| . |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   | . | . | . | . |   |
|   |
|   |   |
|   |   |   |   |
|
|
|   |   |
|
Template Sequence |   |
M | E | L | Y | D | V | D | E | F | W | K | F | . |
. |
Q | M | K | V | G | L | V | K | K | A | E | K | I | K | R | T | K | K | L | I | K | L | I | V | D | F | G | . |
N | E | E | R | T | I | V | T | G | I | A | D | Q | I | P | P | E | . |
. |
. |
. |
E | L | E | G | K | K | F | I | F | V | V | N | L | K | P | K | K |
Template Known Secondary structure |   |
|
|
|
|
|  |  |  |  |  | T | S | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| S | S |
|  |  |  |  |  |  |
| S | . | S |
|  |  |  |  |  |  |
|
| T | T | T | S |
| G | G | . | . | . | . | G | T | T | T |
|  |  |  |  |  |
| S | S |
|
|  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | |
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | G | E | P | S | E | G | M | L | C | S | F | S | E | L | G | I | S | D | D | H | S | G | I | I | E | L | P | A | D | A | P | I | G | T | D | I |
Query Conservation |   |
|
|
|
|   |
|   |
|
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|
|
|
|
|   |   |   | . | . | . |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
F | S | G | V | E | S | Q | G | M | L | I | L | A | E | T | . |
. |
. |
E | D | G | K | V | Y | L | I | P | V | P | E | E | V | P | V | G | A | R | V |
Template Known Secondary structure |   |
 | T | T |  |  |  |
| S |  |  |
|
|  |  |
| . | . | . | T | T | S |
|  |  |
|
| B |
|
| T | T | S |
| T | T |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
  |