Job Description P07395 Confidence 80.34% Date Thu Jan 5 11:00:19 GMT 2012 Rank 98 Aligned Residues 191 % Identity 15% Template c2cj9A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of methanosarcina barkeri seryl-trna2 synthetase complexed with an analog of seryladenylate Resolution 2.3 Å

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		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.		.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		W	Q	A	V	A	P	S	W	R	F	D	M	E	I	E	E	D	L	V	E	E	V	A	R	V	Y	G	Y	N	N	I	P	D	E	P	V	Q	A	S	L	I	M	G	T	H	R	E	A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	.	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q
Query Conservation																																																																.
Alig confidence																																								.																								.
Template Conservation																																								.
Template Sequence		W	N	L	L	W	Q	R	E	P	M	E	H	P	F	K	E	D	P	T	Q	A	M	M	K	E	G	W	L	K	R	G	S	S	R	G	Q	W	I	.	H	G	P	Q	S	A	R	I	F	R	T	F	E	K	I	V	L	E	E	L	L	E	P	L	G	Y	R	E	M	I	F	P	K	L	V	T	W	E	V	W	M
Template Known Secondary structure																	S									T	T	S					S	S	T	T				.																				T	T	T	T	T	T								S
Template Predicted Secondary structure																																								.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		523	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.																														.	.	.	.	.	.	.	550	.	.	.	.	.	.	.		.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		M	I	H	.	.	.	.	P	G	V	E	A	L	L	L	P	S	P	I	S	V	E	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	.	Y	N	Q	N	R	Q	Q	N	R	V	R
Query Conservation					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		K	S	G	H	A	K	G	V	Y	P	E	I	Y	Y	V	C	P	P	Q	T	R	D	P	D	Y	W	E	E	V	A	D	Y	Y	K	V	T	H	E	V	P	T	K	L	I	K	E	K	I	A	E	P	I	G	G	M	C	Y	A	Q	C	P	P	F	W	M	Y	V	A	G	E	T	L	P	N	E	E	I	P	V	K
Template Known Secondary structure				S	G	G	G	T		G	G	G							B	S																		S	S										B		S							S	S	S	S	G	G	G	G	G	G	T	T	T					G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		569	570	.	.	.		.	.	.	.	.	.	580	.	.	.	.	.				.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.		.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure							.													.	.	.																																											.
Query SS confidence							.													.	.	.																																											.
Query Sequence		I	F	E	S	G	.	L	R	F	V	P	D	T	Q	A	P	L	G	.	.	.	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	.	T	G	K	L	N	E	V	E	F	R	A	E	A	N	P	A
Query Conservation							.													.	.	.																																											.
Alig confidence							.													.	.	.																	.	.	.	.	.	.	.																				.				.	.
Template Conservation																																							.	.	.	.	.	.	.																								.	.
Template Sequence		V	F	D	R	S	G	T	S	H	R	Y	E	S	G	G	I	H	G	I	E	R	V	D	E	F	H	R	I	E	I	V	W	I	G	T	K	E	.	.	.	.	.	.	.	E	V	L	K	C	A	E	E	L	H	D	R	Y	M	H	I	F	N	D	I	L	D	I	.	.	E	W	R	K	A	R	V	T	P	W	F
Template Known Secondary structure						S	S								S	S				T	T	S		S															.	.	.	.	.	.	.																				T	S			.	.								S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.																								.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.								.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.
		644
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		398

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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