Job Description P07395 Confidence 92.71% Date Thu Jan 5 11:00:19 GMT 2012 Rank 87 Aligned Residues 156 % Identity 12% Template c1wleB_ PDB info PDB header:ligase Chain: B: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of mammalian mitochondrial seryl-trna2 synthetase complexed with seryl-adenylate Resolution 1.65 Å

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		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.																																									.
Query SS confidence																																					.	.	.	.																																									.
Query Sequence		A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	.	.	.	.	P	G	V	E	A	L	L	L	P	S	P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N	.
Query Conservation																																					.	.	.	.																																									.
Alig confidence																																					.	.	.	.																																									.
Template Conservation
Template Sequence		Q	H	G	L	V	N	F	T	L	N	K	L	I	H	R	G	F	T	P	M	T	V	P	D	L	L	R	G	V	V	F	E	G	C	G	M	T	P	N	A	K	P	S	Q	I	Y	N	I	D	P	S	R	F	E	D	L	N	L	A	G	T	A	E	V	G	L	A	G	Y	F	M	D	H	S	V	A	F	R	D	L
Template Known Secondary structure																T	T								S											T			T	T	S	S	S		S	S		B			T	T	T	S	S	S					S	S										T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.							.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.		.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																	.
Query SS confidence																		.	.	.	.	.	.																	.
Query Sequence		R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	.	.	.	.	.	.	A	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	.	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	E	V	E	F	R	A
Query Conservation																		.	.	.	.	.	.																	.
Alig confidence																		.	.	.	.	.	.																	.										.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		P	I	R	M	V	C	S	S	T	C	Y	R	A	E	T	D	T	G	K	E	P	W	G	L	Y	R	V	H	H	F	T	K	V	E	M	F	G	V	T	G	P	G	L	E	Q	S	S	E	.	.	.	.	.	.	L	L	E	E	F	L	S	L	Q	M	E	I	L	T	E	L	G	L	H	F	R	V	L	D	M	P
Template Known Secondary structure		S															S	S					S	S	S	T	T		S													S	S							.	.	.	.	.	.																T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.							350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		639	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	N	P	A	L	H	P	G	Q	S	A	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	E	L	G	L	P	A	Y	R	K	F	D	I
Template Known Secondary structure		G	G	G	S	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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