Job Description P07395 Confidence 94.20% Date Thu Jan 5 11:00:19 GMT 2012 Rank 79 Aligned Residues 179 % Identity 12% Template c1nj8C_ PDB info PDB header:ligase Chain: C: PDB Molecule:proline-trna synthetase; PDBTitle: crystal structure of prolyl-trna synthetase from2 methanocaldococcus janaschii Resolution 3.20 Å

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		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.						.	.	.	.	.	.	530	.	.	.	.				.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.		560	.
Predicted Secondary structure																																			.	.	.	.	.												.	.	.																										.
Query SS confidence																																			.	.	.	.	.												.	.	.																										.
Query Sequence		A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	.	.	.	.	.	I	H	P	G	V	E	A	L	L	L	P	.	.	.	S	P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	.	Q	N
Query Conservation																																			.	.	.	.	.												.	.	.																										.
Alig confidence																																			.	.	.	.	.												.	.	.																										.
Template Conservation
Template Sequence		R	R	Y	T	F	E	I	I	R	N	L	L	D	E	S	G	H	D	E	A	L	F	P	M	L	I	P	E	D	L	L	A	K	E	A	E	H	I	K	G	F	E	D	E	V	Y	W	V	T	H	G	G	K	T	Q	L	D	V	K	L	A	L	R	P	T	S	E	T	P	I	Y	Y	M	M	K	L	W	V	K	V
Template Known Secondary structure																T	T								S												S	S	S	G	G	G	G	G	G							S	S	S	S										S	S	S										T	T			B
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.		580	.	.	.	.			.	.	.	.	.	590	.	.	.		.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure																				.						.	.										.
Query SS confidence																				.						.	.										.
Query Sequence		R	Q	Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	.	T	Q	A	P	L	.	.	G	I	R	Q	D	L	M	L	A	.	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	E	V	E	F	R
Query Conservation																				.						.	.										.
Alig confidence																				.						.	.										.														.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		H	T	D	L	P	I	K	I	Y	Q	I	V	N	T	F	R	Y	E	T	K	H	T	R	P	L	I	R	L	R	E	I	M	T	F	K	E	A	H	T	A	H	S	T	K	E	E	A	E	N	.	.	.	.	.	.	Q	V	K	E	A	I	S	I	Y	K	K	F	F	D	T	L	G	I	P	Y	L	I	S	K	R
Template Known Secondary structure		T	T	S																	S			B	T	T	T	B		S	S		S										S	S							.	.	.	.	.	.																	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.						.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I	Y	L	.	.	.	.	.	K	G	E	R	I	G	F	V	G	V	V	H	P	E	L	E	R	K	L	D	L
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.
Template Conservation
Template Sequence		P	E	W	D	K	F	P	G	A	E	Y	T	M	A	F	D	T	I	F	P	D	G	R	T	M	Q	I	A	T	V	H	N	L	G	Q	N	F	S	K	T	F	E	I
Template Known Secondary structure			T	T	S			T	T		S										T	T	S													T						T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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