Job Description P07395 Confidence 91.41% Date Thu Jan 5 11:00:19 GMT 2012 Rank 89 Aligned Residues 175 % Identity 15% Template c1nj2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:proline-trna synthetase; PDBTitle: crystal structure of prolyl-trna synthetase from methanothermobacter2 thermautotrophicus Resolution 3.11 Å

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		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	G	V	E	A	L	L	L	P	S	P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	.	Q	N	R	Q	Q	N	R	V	R	I
Query Conservation																																																																							.
Alig confidence															.																								.	.	.																														.
Template Conservation															.																								.	.	.
Template Sequence		R	K	N	T	L	K	I	L	R	R	I	L	D	.	R	D	H	E	E	V	L	F	P	L	L	V	P	E	D	E	L	A	E	V	Y	W	V	.	.	.	T	H	G	G	L	S	K	L	Q	R	K	L	A	L	R	P	T	S	E	T	V	M	Y	P	M	F	A	L	W	V	R	S	H	T	D	L	P	M	R	F
Template Known Secondary structure														T	.	T	T								S														.	.	.			S	S	S	S										S		T														S	T	T	T
Template Predicted Secondary structure															.																								.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.				.	.	.	.	.	590	.	.	.		.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure																	.	.	.										.
Query SS confidence																	.	.	.										.
Query Sequence		F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	.	.	.	G	I	R	Q	D	L	M	L	A	.	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	E	V	E	F	R	A	E	A	N	P	A	L	H
Query Conservation																	.	.	.										.
Alig confidence																	.	.	.										.														.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		Y	Q	V	V	N	T	F	R	Y	E	T	K	H	T	R	P	L	I	R	V	R	E	I	T	T	F	K	E	A	H	T	I	H	A	T	A	S	E	A	E	E	.	.	.	.	.	.	Q	V	E	R	A	V	E	I	Y	K	E	F	F	N	S	L	G	I	P	Y	L	I	T	R	R	P	P	W	D	K	F	P	G
Template Known Secondary structure													S			B	T	T	T	B		S													S	S							.	.	.	.	.	.																	T							B			T	T	T	S		T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		646	.	.	.	650	.	.	.	.						.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		P	G	Q	S	A	A	I	Y	L	.	.	.	.	.	K	G	E	R	I	G	F	V	G	V	V	H	P	E	L	E	R	K	L	D	L
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.
Template Conservation
Template Sequence		S	E	Y	T	V	A	F	D	T	L	M	P	D	G	K	T	L	Q	I	G	T	V	H	N	L	G	Q	T	F	A	R	T	F	E	I
Template Known Secondary structure			S										T	T	S													S							T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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