Job Description P07395 Confidence 86.66% Date Thu Jan 5 11:00:19 GMT 2012 Rank 94 Aligned Residues 177 % Identity 12% Template c1h4tD_ PDB info PDB header:aminoacyl-trna synthetase Chain: D: PDB Molecule:prolyl-trna synthetase; PDBTitle: prolyl-trna synthetase from thermus thermophilus complexed2 with l-proline Resolution 2.9 Å

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		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.		.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																																.
Query SS confidence																																								.																																.
Query Sequence		A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	G	V	.	E	A	L	L	L	P	S	P	I	S	V	E	M	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	.	Q	N	R	Q	Q	N	R	V	R
Query Conservation																																								.																																.
Alig confidence																																	.	.						.																																.
Template Conservation																																	.	.
Template Sequence		W	E	N	I	Q	Q	V	L	D	R	M	F	K	E	T	G	H	Q	N	A	Y	F	P	L	F	I	P	M	S	F	L	.	.	F	S	P	E	L	A	V	V	T	H	A	G	G	E	E	L	E	E	P	L	A	V	R	P	T	S	E	T	V	I	G	Y	M	W	S	K	W	I	R	S	W	R	D	L	P	Q	L
Template Known Secondary structure																T	T								S				G	G	G		.	.			S	S								T	T											S																B	G	G	G
Template Predicted Secondary structure																																	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.			.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.		.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure																		.	.																																												.
Query SS confidence																		.	.																																												.
Query Sequence		I	F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	.	.	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	.	T	G	K	L	N	E	V	E	F	R	A	E	A	N	P	A	L	H
Query Conservation																		.	.																																												.
Alig confidence																		.	.																							.	.	.	.	.	.																.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		L	N	Q	W	G	N	V	V	R	W	E	M	R	T	R	P	F	L	R	T	S	E	F	L	W	Q	E	G	H	T	A	H	A	T	R	E	E	A	E	E	.	.	.	.	.	.	E	V	R	R	M	L	S	I	Y	A	R	L	A	R	E	Y	A	A	I	P	V	I	E	G	L	K	T	E	K	E	K	F	A	G
Template Known Secondary structure													S	S		B	T	T	T	B		S												S	S							.	.	.	.	.	.																												G	G	G	S		T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		646	.	.	.	650	.	.	.	.						.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		P	G	Q	S	A	A	I	Y	L	.	.	.	.	.	K	G	E	R	I	G	F	V	G	V	V	H	P	E	L	E	R	K	L	D	L
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.
Template Conservation
Template Sequence		A	V	Y	T	T	T	I	E	A	L	M	K	D	G	K	A	L	Q	A	G	T	S	H	Y	L	G	E	N	F	A	R	A	F	D	I
Template Known Secondary structure			S										T	T	S													T						T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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