Job Description P07395 Confidence 95.41% Date Thu Jan 5 11:00:19 GMT 2012 Rank 73 Aligned Residues 166 % Identity 9% Template c1atiA_ PDB info PDB header:protein biosynthesis Chain: A: PDB Molecule:glycyl-trna synthetase; PDBTitle: crystal structure of glycyl-trna synthetase from thermus thermophilus Resolution 2.75 Å

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		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.							.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.			.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.																										.	.																								.	.	.	.
Query SS confidence																						.	.	.	.	.	.																										.	.																								.	.	.	.
Query Sequence		E	E	D	L	V	E	E	V	A	R	V	Y	G	Y	N	N	I	P	D	E	.	.	.	.	.	.	P	V	Q	A	S	L	I	M	G	T	H	R	E	A	D	L	S	L	K	R	V	K	T	L	L	.	.	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	.	.	.	.
Query Conservation																						.	.	.	.	.	.																										.	.																								.	.	.	.
Alig confidence																.						.	.	.	.	.	.																										.	.																								.	.	.	.
Template Conservation																.
Template Sequence		S	L	D	E	L	V	A	L	C	K	R	R	G	F	.	I	F	Q	S	S	E	I	Y	G	G	L	Q	G	V	Y	D	Y	G	P	L	G	V	E	L	K	N	N	L	K	Q	A	W	W	R	R	N	V	Y	E	R	D	D	M	E	G	L	D	A	S	V	L	T	H	R	L	V	L	H	Y	S	G	H	E	A	T
Template Known Secondary structure													T	T	S	.				T	T	G	G	G	T			T	T																								T	T	S		S	S								S				T	T					T	S
Template Predicted Secondary structure																.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		526	.	.	.	530	.	.															.	.	.	.	.	.	.	540	.	.			.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.			.	.	.	.	570	.	.	.	.	.	.	.	.	.				580	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																								.	.															.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																								.	.															.	.	.
Query Sequence		P	G	V	E	A	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	S	P	I	S	V	E	M	S	.	.	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N	.	.	R	V	R	I	F	E	S	G	L	R	F	V	P	D	.	.	.	T	Q	A	P	L
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																								.	.															.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																								.	.															.	.	.
Template Conservation
Template Sequence		F	A	D	P	M	V	D	N	W	T	P	P	R	Y	F	N	M	M	F	Q	D	L	R	G	P	R	G	G	R	G	L	L	A	Y	L	R	P	E	T	A	Q	G	I	F	V	N	F	K	N	V	L	D	A	T	S	R	K	L	G	F	G	I	A	Q	I	G	K	A	F	R	N	E	I	T	P	R	N	F	I	F
Template Known Secondary structure																			B						S	S				G	G	G						S	S	S							T									T			S	S											B			S	S			T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L
Query Conservation
Alig confidence																	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		R	V	R	E	F	E	Q	M	E	I	E	Y	F	V	R	.	.	.	.	.	.	.	P	G	E	D	E	Y	W	H	R	Y	W	V	E	E	R	L	K	W	W	Q	E	M	G	L	S
Template Known Secondary structure		S		S													.	.	.	.	.	.	.	G	G	G																			T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions