Return to main results Retrieve Phyre Job Id

Job DescriptionP21515
Confidence2.65%DateThu Jan 5 11:38:26 GMT 2012
Rank99Aligned Residues42
% Identity10%Templatec3solA_
PDB info PDB header:protein transportChain: A: PDB Molecule:type ii secretion pathway related protein; PDBTitle: crystal structure of the type 2 secretion system pilotin gsps
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110.........120........
Predicted Secondary structure 






Query SS confidence 










































Query Sequence  SRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLW
Query Conservation 
  
        
  
    
  
      

         
 
Alig confidence 









.































Template Conservation   


      . 
   
  


 
  
 

   

  

  
 
Template Sequence  GKGWQSLTQE. DIRKHSDDIYVRLTRDSTPEYIKCREFNRRLV
Template Known Secondary structure  TT

S

.

S
T
Template Predicted Secondary structure 




.




Template SS confidence 










































   57..60...... ...70.........80.........90........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions