Return to main results Retrieve Phyre Job Id

Job DescriptionP21515
Confidence8.87%DateThu Jan 5 11:38:26 GMT 2012
Rank10Aligned Residues54
% Identity17%Templatec2jr5A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:upf0350 protein vc_2471; PDBTitle: solution structure of upf0350 protein vc_2471. northeast2 structural genomics target vcr36
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100... ......110.........120.........130.
Predicted Secondary structure 




.......



Query SS confidence 


























. . . . . . .



























Query Sequence  LDVMWDHFLSRHWSQLSPDFPLQEFVC. . . . . . . YAREQVMTILPDSPPRFINLNNYLWSEQ
Query Conservation   

  




  
        
  
  .......  
  
      

         
   
Alig confidence 


















.






.......



























Template Conservation 





 
       

  .
   

 

   
 

  

 
    

     

  

   
Template Sequence  LDVVIMPFFEECFDSLTES. EQDDFVALLESDDPDLFAWVMGHGRCENLGLAAMVDKIVAHN
Template Known Secondary structure  TTTTTTT

.TS

T



S
Template Predicted Secondary structure 


.










Template SS confidence 





























































   21........30......... 40.........50.........60.........70.........80.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions