Return to main results Retrieve Phyre Job Id

Job DescriptionP21515
Confidence4.05%DateThu Jan 5 11:38:26 GMT 2012
Rank37Aligned Residues25
% Identity16%Templatec1ce0B_
PDB info PDB header:hiv-1 envelope proteinChain: B: PDB Molecule:protein (leucine zipper model h38-p1); PDBTitle: trimerization specificity in hiv-1 gp41: analysis with a2 gcn4 leucine zipper model
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.....
Predicted Secondary structure 


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Query Sequence  SRRPRLDALRDSWYDLDAHYDALET
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Template Sequence  RLLQRIKQQEDKLEETLSKIYHLEN
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   1........10.........20.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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