Job Description P0ABR9 Confidence 28.31% Date Thu Jan 5 11:16:10 GMT 2012 Rank 50 Aligned Residues 101 % Identity 21% Template d8ruca1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.60

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	S	A	A	G	E	L	P	V	P	V	E	L	A	E	A	C	A	H	A	V	M	K	S	G	I	D	L	A	V	S	Y	C	M	Q	V	D	H	G	F	A	Q	P	L	E	F	L	L	G	G	L	D	K	V	P	V	L	P	V	F	I	N	G	V	A	T	P	L	P	G	F	Q	R	T	R	M	L	G	E
Query Conservation
Alig confidence																																				.	.	.	.											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	T	V	V	G	K	L	E	G	E	R	D	I	T	L	G	F	V	D	L	L	R	D	D	Y	T	E	K	D	R	S	R	G	.	.	.	.	I	Y	F	T	Q	S	W	V	S	T	.	.	.	.	.	.	P	G	V	L	P	V	A	S	G	G	I	H	V	.	.	.	.	.	.	.	.	.	.	.	W	H
Template Known Secondary structure					S	S	S	S	S																	S					B	G	G	G	T	.	.	.	.	B		S					T	T		.	.	.	.	.	.									S	S			G	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																				.	.	.	.											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.					.	.	.	.	.	.	.	.	370	.							.	.	.	.	.	.	.	.	380	.	.	.	.												.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	G	R	F	T	S	T	L	N	K	R	V	L	F	L	G	S	G	G	L	S	H	Q	P	P	V	P	E	L	A	K	A	D	A	H	M	R	D	R	L	L	G	S	G	K	D	L	P	A	S	E	R	E	L	R	Q	Q	R	V	I	S	A	A	E	K	F	V	E	D	Q	R	T	L	H	P	L	N	P	I
Query Conservation
Alig confidence		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	M	P	A	L	T	E	I	F	G	D	D	S	V	L	Q	F	G	G	G	T	L	G	H	P	W	G	N	A	P	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	N	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A
Template Known Secondary structure		.										S	S	S					S					T	S	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.																					.	.	420	.	.																							.
		237	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	N	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	A	C	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions