|   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | E | L | V | V | L | F | A | P | D | H | Y | N | G | F | F | Y | D | V | M | P | P | F | C | L | G | V | G | A | T | A | . |
I | G | D | F | G | S | A | A | G | E | L | . |
P | V | P | V | E | L | A | E | A | C | A | H | A | V | M | K | S | . |
. |
. |
. |
. |
G | I | D | L | A | V | S | Y | C | M | Q | V | D |
Query Conservation |   |
  |
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   | . |   |
|
|   |   |   |   |   |   |   |
| . |   |   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |   | . | . | . | . | . |
|
|
|   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|   |
|   |
|
|
|
|
|
|
| . | . | . | . |
|
|   |   |   |   |
|   |
|
|
|
|   |
|
|
|   |
|   |
|   |   |
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
| . | . | . |
Template Sequence |   |
D | F | E | E | I | L | F | A | S | R | H | . |
. |
. |
. |
S | S | K | D | G | R | K | I | F | T | V | H | V | S | G | N | V | G | T | A | D | F | G | G | K | P | Y | S | L | A | K | P | S | P | Q | T | M | K | N | Y | V | L | A | L | R | E | R | L | D | R | K | P | E | F | E | F | T | M | E | V | T | H | . |
. |
. |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  | . | . | . | . |  |
| T | T |
|
|
|  |  |  |  |  |
|
| B |
| S | S |
|
| T | T | S | S |
| T | T |
| B |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G | S | T | T |
|  |  |  |  |
|
| S |
| . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | |
|
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
|
|
  |
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
. | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | G | F | A | Q | P | L | E | F | L | L | G | G | L | D | K | V | P | V | L | P | V | F | I | N | G | V | A | T | P | L | P | G | F | Q | R | T | R | M | L | G | E | A | I | G | R | F | T | S | T | L | . |
N | K | R | V | L | F | L | G | S | G | G |
Query Conservation |   |
|
|   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |   | . |
|   |
|
|   |
|
|
|
|
|   |
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
| . | . | . | . | . | . | . | . |
|   |
|   | . |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
Template Sequence |   |
H | G | P | . |
. |
. |
. |
. |
. |
. |
. |
S | E | I | S | . |
K | P | S | A | F | Y | E | I | G | S | T | E | E | E | W | K | D | R | E | A | A | E | V | V | A | E | A | M | L | D | A | I | R | A | E | K | M | D | W | N | V | A | V | G | V | G | G |
Template Known Secondary structure |   |
S | S |
| . | . | . | . | . | . | . | . |
|
|
|
| . | S |
|  |  |  |  |  |  |  |  | S |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
139 | 140 | . | |
|
|
|
|
|
|
|
. | . | . | . | |
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |