Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABR9
Confidence48.32%DateThu Jan 5 11:16:10 GMT 2012
Rank21Aligned Residues141
% Identity11%Templatec3giuA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pyrrolidone-carboxylate peptidase; PDBTitle: 1.25 angstrom crystal structure of pyrrolidone-carboxylate peptidase2 (pcp) from staphylococcus aureus
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70...... ...80......... 90......
Predicted Secondary structure 



























.










.........
Query SS confidence 

















































.












. . . . . . . . .






Query Sequence  VNGVIASARERIAAFSPELVVLFAPDHYNGFFYDVMPPFCLGVGATAIGD. FGSAAGELPVPVE. . . . . . . . . LAEACAH
Query Conservation     
   
   
    

 







    
    
 
 
       

.       
    
.........

  
  
Alig confidence 
































..














.












.........






Template Conservation         
   
    

 


 
       
 ..

  
 
      

  
  
    
   

    
 

      
Template Sequence  FKKVDNIINKTLASNHYDVVLAIGQAGGRNAIT. . PERVAINIDDARIPDNDDFQPIDQAIHLDGAPAYFSNLPVKAXTQ
Template Known Secondary structure  S

S
TT

SB..B
S

SS

TTS



S
TTS
S

S
Template Predicted Secondary structure 








..


























Template SS confidence 















































































   44.....50.........60.........70...... ...80.........90.........100.........110.........120.
 
   97..100.........110... ......120.........130.........140. ........150.........160.....
Predicted Secondary structure 









...












........






Query SS confidence 
















. . .



























. . . . . . . .























Query Sequence  AVMKSGIDLAVSYCMQV. . . DHGFAQPLEFLLGGLDKVPVLPVFINGV. . . . . . . . ATPLPGFQRTRMLGEAIGRFTSTL
Query Conservation   
   


        
...


  


 

       




 

  ........  
     
   

 

   
   
Alig confidence 
















...



























........























Template Conservation   
   

   

 


 



 
 
 

           
 




             
  
      
   
  
   
Template Sequence  SIINQGLPGALSNSAGTFVCNHTLYHLGYLQDKHYPHLRFGFIHVPYIPEQVIGKPDTPSXPLEKIVAGLTAAIEAISND
Template Known Secondary structure  TT

B

BS


SST
TT



GGGGTT
TT




T

SS
Template Predicted Secondary structure 































Template SS confidence 















































































   122.......130.........140.........150.........160.........170.........180.........190.........200.
 
   166...
Predicted Secondary structure  .


Query SS confidence  .



Query Sequence  . NKRV
Query Conservation  .
 

Alig confidence  .



Template Conservation   
   
Template Sequence  EDLHL
Template Known Secondary structure 




Template Predicted Secondary structure 




Template SS confidence 




   202....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions