Job Description P0ABR9 Confidence 99.91% Date Thu Jan 5 11:16:10 GMT 2012 Rank 3 Aligned Residues 226 % Identity 14% Template c3bd0D_ PDB info PDB header:peptide binding protein Chain: D: PDB Molecule:protein memo1; PDBTitle: crystal structure of memo, form ii Resolution 3.01 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	A	S	A	R	E	R	I	A	A	F	S	P	E	L	V	V	L	F	A	P	D	H	Y	N	G	F	F	Y	D	V	M	P	P	F	C	L	G	V	G	A	T	A	I	G	D	F	G	S	A	A	G	E	L	P	V	P	V	E	L	A	E	A	C	A	H	A	V	M	K	S	G	I	D	L	A	V	S
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.
Template Sequence		S	C	A	A	H	A	Y	K	Q	V	D	P	S	I	T	R	R	I	F	I	L	G	P	S	H	H	V	.	.	.	.	.	.	.	.	.	P	L	S	R	C	A	L	S	S	V	D	I	Y	R	T	P	L	Y	D	L	R	I	D	Q	K	I	Y	G	E	L	W	K	T	G	M	F	E	R	M	S	L	Q	T	D
Template Known Secondary structure									T	T			T	T	T											S	S	S	.	.	.	.	.	.	.	.	.			S	S					S	S	S					S	S					B										T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		Y	C	M	Q	V	D	H	G	F	A	Q	P	L	E	F	L	L	G	G	L	.	.	.	.	D	K	V	P	V	L	P	V	F	I	N	G	V	A	T	P	L	P	G	F	Q	R	T	R	M	L	G	E	A	I	G	R	F	T	S	T	L	N	K	R	V	L	F	L	G	S	G	G	L	S	H	Q	P	P	V	P
Query Conservation																						.	.	.	.
Alig confidence				.	.	.																.	.	.	.											.	.	.	.	.																					.	.
Template Conservation				.	.	.																														.	.	.	.	.																					.	.
Template Sequence		E	D	.	.	.	E	H	S	I	E	M	H	L	P	Y	T	A	K	A	M	E	S	H	K	D	E	F	T	I	I	P	V	L	V	.	.	.	.	.	G	A	L	S	E	S	K	E	Q	E	F	G	K	L	F	S	K	Y	L	A	.	.	D	P	S	N	L	F	V	V	S	S	D	F	C	H	W	G	Q	R	F
Template Known Secondary structure				.	.	.			T	T	G	G	G								T	G	G	G	T	T	S									.	.	.	.	.		S																		T	.	.		T	T													B	G	G	G
Template Predicted Secondary structure				.	.	.																														.	.	.	.	.																					.	.
Template SS confidence
		128	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	K	A	D	A	H	M	R	D	R	L	L	G	S	G	K	D	L	P	A	S	E	R	E	L	R	Q	Q	R	V	I	S	A	A	E	K	F	V	E	D	Q	R	T	L	H	P	L	N	P	I	W	D	N	Q	F	M	T	L	L	E	Q	G	R	I	Q	E	L	D	A	V	S	N	E	E	L	S	A	I
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		R	Y	S	Y	Y	D	E	S	Q	G	E	I	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	E	H	L	D	K	M	G	M	S	I	I	E	Q	L	D	P	V	S	F	S	N	Y	.	.	L	K	K	Y	H	N
Template Known Secondary structure		T	B					G	G	G	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T									.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.																																			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																										.	.	.	.									.	.	.	.	.	.
Query SS confidence																										.	.	.	.									.	.	.	.	.	.
Query Sequence		A	G	K	S	T	H	E	I	K	T	W	V	A	A	F	A	A	I	S	A	F	G	N	W	.	.	.	.	R	S	E	G	R	Y	Y	R	.	.	.	.	.	.	P	I	P	E	W	I	A	G	F	G	S	L	S	A	R	T
Query Conservation																										.	.	.	.									.	.	.	.	.	.
Alig confidence						.	.	.																		.	.	.	.									.	.	.	.	.	.
Template Conservation						.	.	.
Template Sequence		T	I	C	G	.	.	.	R	H	P	I	G	V	L	L	N	A	I	T	E	L	Q	K	N	G	M	N	M	S	F	S	F	L	N	Y	A	Q	S	S	Q	C	R	N	W	Q	D	S	S	V	S	Y	A	A	G	A	L	T	V
Template Known Secondary structure				T	T	.	.	.																T	T	T													S	S				S	T	T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		242	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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