Job Description P09029 Confidence 100.00% Date Thu Jan 5 11:01:47 GMT 2012 Rank 4 Aligned Residues 339 % Identity 31% Template c3uvzB_ PDB info PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	V	C	V	L	G	N	G	Q	L	G	R	M	L	R	Q	A	G	E	P	L	G	I	A	V	W	P	V	G	L	D	A	E	P	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	T	A	E	I	E	R	W	P	E	T	A	L	T	R	E
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	W	L	G	M	V	G	G	G	Q	L	G	R	M	F	C	F	A	A	Q	S	M	G	Y	R	V	A	V	L	D	P	D	P	A	S	P	A	G	A	V	A	D	R	H	L	R	A	A	Y	D	D	E	A	A	L	A	E	L	A	G	L	C	E	A	V	S	T	E	F	E	N	V	P	A	A	S	L	D	F	L
Template Known Secondary structure										S													T	T								S		T	T		T	T	T	T	T	S	S					S		T	T													S					S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T	A	P	W	Q	L	L	A	E	R	S	E	W	P	A	V	F	D	R	L	G	E	L	A	I	V	K	R	R	T	G	G	Y	D	G	R	G	Q	W	R	L	R	A	N	E	T	E	Q
Query Conservation
Alig confidence																																																				.	.
Template Conservation																																																				.	.
Template Sequence		A	R	T	T	F	V	A	P	A	G	R	C	V	A	V	A	Q	D	R	I	A	E	K	R	F	I	E	A	S	G	V	P	V	A	P	H	V	V	I	E	S	A	A	A	L	A	A	L	D	D	.	.	A	A	L	D	A	V	L	P	G	I	L	K	T	A	R	K	G	Q	V	R	V	S	T	A	R	E	A	R
Template Known Secondary structure			T	T	S			S	S										S											T	T			B		S						S						T				.	.					T	T		S															S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		142	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.																																																			.
Query SS confidence								.	.																																																			.
Query Sequence		L	P	A	E	C	Y	.	.	G	E	C	I	V	E	Q	G	I	N	F	S	G	E	V	S	L	V	G	A	R	G	F	D	G	S	T	V	F	Y	P	L	T	H	N	L	H	Q	D	G	I	L	R	T	S	V	A	F	P	Q	.	A	N	A	Q	Q	Q	A	Q	A	E	E	M	L	S	A	I	M	Q	E	L	G
Query Conservation								.	.																																																			.
Alig confidence								.	.																																																			.
Template Conservation
Template Sequence		D	A	H	A	A	L	G	G	V	P	C	V	L	E	K	R	L	P	L	K	Y	E	V	S	A	L	I	A	R	G	A	D	G	R	S	A	A	F	P	L	A	Q	N	V	H	H	N	G	I	L	A	L	T	I	V	P	A	P	A	A	D	T	A	R	V	E	E	A	Q	Q	A	A	V	R	I	A	D	T	L	G
Template Known Secondary structure							T	T	T																							T	T	S														T	T								S		S	S																					T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	G	V	M	A	M	E	C	F	V	T	P	Q	G	.	L	L	I	N	E	L	A	P	R	V	H	N	S	G	H	W	T	Q	N	G	A	S	I	S	Q	F	E	L	H	L	R	A	I	T	D	L	P	L	P	Q	P	V	V	N	N	P	S	V	M	I	N	L	I	G	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	G	V	L	C	V	E	F	F	V	L	E	D	G	S	F	V	A	N	E	M	A	P	R	P	H	N	S	G	H	Y	T	V	D	A	C	A	T	S	Q	F	E	Q	Q	V	R	A	M	T	R	M	P	L	G	N	P	R	Q	H	S	P	A	A	M	L	N	I	L	G	D	V	W	F	P	N	G	A	A	A
Template Known Secondary structure														T	T	S									S	S			G	G	G	T	T					B	S	S												T								B		S									G	G	G	G		T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
					288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure		.	.	.																					.
Query SS confidence		.	.	.																					.
Query Sequence		.	.	.	S	D	V	N	Y	D	W	L	K	L	P	L	V	H	L	H	W	Y	D	K	.	E	V	R	P	G	R	K	V	G	H	L	N	L	T	D	S	D	T	S	R	L	T	A	T	L	E	A	L	I	P	L	L	P	P	E
Query Conservation		.	.	.																					.
Alig confidence		.	.	.																					.
Template Conservation
Template Sequence		G	A	V	T	P	P	W	D	T	V	A	A	M	P	A	A	H	L	H	L	Y	G	K	E	E	A	R	V	G	R	K	M	G	H	V	N	F	T	A	E	M	R	D	D	A	V	A	A	A	T	A	C	A	Q	L	L	R	V	P
Template Known Secondary structure														S	T	T									S				T	T											S	S																T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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