Job Description P09029 Confidence 100.00% Date Thu Jan 5 11:01:47 GMT 2012 Rank 12 Aligned Residues 348 % Identity 13% Template c3ouzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:biotin carboxylase; PDBTitle: crystal structure of biotin carboxylase-adp complex from campylobacter2 jejuni Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.																														.	.	.	.	.
Predicted Secondary structure																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		M	K	Q	V	C	V	L	G	N	G	Q	L	G	R	M	L	R	Q	A	G	E	P	L	G	I	A	V	W	P	V	.	.	G	L	D	A	E	P	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	T	A	.
Query Conservation																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		I	K	S	I	L	I	A	N	R	G	E	I	A	L	R	A	L	R	T	I	K	E	X	G	K	K	A	I	C	V	Y	S	E	A	D	K	D	A	L	Y	L	K	Y	A	D	A	S	I	C	I	G	K	A	R	S	S	E	S	Y	L	N	I	P	A	I	I	A	A	A	E	I	A	E	A	D	A	I	F	P	G
Template Known Secondary structure																								T	T									G	G	G	T	T		T					S	S									T	T	T	T	G	G	G													T		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
					49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure		.	.	.																																																			.	.
Query SS confidence		.	.	.																																																			.	.
Query Sequence		.	.	.	E	I	E	R	W	P	E	T	A	L	T	R	E	L	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T	A	P	W	Q	.	.	L	L	A	E	R	S	E	W	P	A	V	F	D	R	L	G	E	L	A	I	V	K	R	R	T
Query Conservation		.	.	.																																																			.	.
Alig confidence		.	.	.																																																			.	.
Template Conservation
Template Sequence		Y	G	F	L	S	E	N	Q	N	F	V	E	I	C	A	K	H	N	I	K	F	I	G	P	S	V	E	A	X	N	L	X	S	D	K	S	K	A	K	Q	V	X	Q	R	A	G	V	P	V	I	P	G	S	D	G	A	L	A	G	A	E	A	A	K	K	L	A	K	E	I	G	Y	P	V	I	L	K	A	A	A
Template Known Secondary structure		S	S	T	T	T	T											T	T				S	S											S											T	T			B		S	B		S	S	S			S													S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.											.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.																																							.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.																																							.
Query Sequence		G	G	Y	D	G	R	G	Q	W	R	L	R	A	N	E	T	E	Q	L	P	A	E	.	.	.	.	.	.	.	.	.	.	C	Y	G	E	C	I	V	E	Q	G	I	N	F	S	G	E	V	S	L	V	G	A	R	G	F	D	G	S	T	V	F	Y	P	L	T	H	N	L	.	H	Q	D	G	I	L	R	T	S
Query Conservation																								.	.	.	.	.	.	.	.	.	.																																							.
Alig confidence		.																						.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation		.
Template Sequence		.	G	G	G	G	R	G	X	R	V	V	E	N	E	K	D	L	E	K	A	Y	W	S	A	E	S	E	A	X	T	A	F	G	D	G	T	X	Y	X	E	K	Y	I	Q	N	P	R	H	I	E	V	Q	V	I	G	D	S	F	G	N	V	I	H	V	G	E	R	D	C	S	X	Q	R	R	H	Q	K	L	I	E
Template Known Secondary structure		.			T	T		S						S	G	G	G																	S											S	S												T	T	S															T	T
Template Predicted Secondary structure		.
Template SS confidence
			163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		193	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure							.																																					.
Query SS confidence							.																																					.
Query Sequence		V	A	F	P	Q	.	A	N	A	Q	Q	Q	A	Q	A	E	E	M	L	S	A	I	M	Q	E	L	G	Y	V	G	V	M	A	M	E	C	F	V	T	P	Q	G	.	L	L	I	N	E	L	A	P	R	V	H	N	S	G	H	W	T	Q	N	G	A	S	I	S	Q	F	E	L	H	L	R	A	I	T	D	L	P
Query Conservation							.																																					.
Alig confidence							.																																					.
Template Conservation
Template Sequence		E	S	P	A	I	L	L	D	E	K	T	R	T	R	L	H	E	T	A	I	K	A	A	K	A	I	G	Y	E	G	A	G	T	F	E	F	L	V	D	K	N	L	D	F	Y	F	I	E	X	N	T	R	L	Q	V	E	H	C	V	S	E	X	V	S	G	I	D	I	I	E	Q	X	I	K	V	A	E	G	Y	A
Template Known Secondary structure				S		T	T	S																			T	T													T	T										S	S			T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.												.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.									.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		L	P	Q	P	V	V	N	N	P	S	V	M	I	N	.	.	.	.	.	.	.	.	.	.	.	L	I	G	S	D	V	N	Y	D	W	L	K	L	P	L	V	H	L	H	W	Y	D	K	E	V	R	P	G	.	.	.	.	.	.	.	.	R	K	V	G	H	L	N	L	T	D	S	D	T	S	R	L	T	A	T
Query Conservation																.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	S	Q	E	S	I	K	L	N	G	H	S	I	E	C	R	I	T	A	E	D	S	K	T	F	L	P	S	P	G	K	I	T	K	Y	I	P	P	A	G	R	N	V	R	X	E	S	H	C	Y	Q	D	Y	S	V	P	A	Y	Y	D	S	X	I	G	K	L	V	V	W	A	E	D	R	N	K	A	I	A	K
Template Known Secondary structure					G	G	G					S									S	B		T	T	T			B						S							S	T	T									T	T					T	T	T												S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		332	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		L	E	A	L	I	P	L	L	P	P	E	.	Y	A	S	G	V	I	W
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		X	K	V	A	L	D	E	L	L	I	S	G	I	K	T	T	K	D	F
Template Known Secondary structure													S	S			T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions