Job Description P09029 Confidence 100.00% Date Thu Jan 5 11:01:47 GMT 2012 Rank 24 Aligned Residues 344 % Identity 12% Template c3lp8A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine-glycine ligase; PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from2 ehrlichia chaffeensis Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		K	Q	V	C	V	L	G	N	G	Q	L	G	R	M	L	R	Q	A	G	E	P	L	G	I	A	V	W	P	V	G	L	D	A	E	P	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	T	A	E	I	E	R	W	P	E	T	A	L	T	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		M	N	V	L	V	I	G	S	G	G	R	E	H	S	M	L	H	H	I	R	K	S	T	L	L	N	K	L	F	I	A	P	G	R	E	G	M	S	G	L	A	D	I	I	D	I	D	I	N	S	T	I	E	V	I	Q	V	C	K	K	E	K	I	E	L	V	V	I	G	P	E	T	P	L	M	N	G	L	S	D
Template Known Secondary structure										S											T	T		T	T											G	G	G	T	T	T	S							T	T												T	T								S						T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	E	L	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T	A	P	W	Q	L	L	A	E	R	S	E	W	P	A	V	F	D	R	L	G	E	L	A	I	V	K	R	R	T	G	G	Y	D	G	R	G	Q	W	R	L	R	A	N
Query Conservation		.	.
Alig confidence		.	.																																																																	.
Template Conservation																																																																				.
Template Sequence		A	L	T	E	E	G	I	L	V	F	G	P	S	K	A	A	A	R	L	E	S	S	K	G	F	T	K	E	L	C	M	R	Y	G	I	P	T	A	K	Y	G	Y	F	V	D	T	N	S	A	Y	K	F	I	D	K	H	K	L	P	L	V	V	K	A	D	G	.	L	A	Q	G	K	G	T	V	I	C	H	T	H
Template Known Secondary structure						T	T					S																							T			B							S	S											S		S	S						S	S	.			T	T	T	S					S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.											.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.													180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	E	Q	L	P	A	E	C	.	.	.	.	.	.	.	.	.	.	Y	G	E	C	I	V	E	Q	G	I	N	F	S	G	E	V	S	L	V	G	A	R	G	F	D	G	S	T	V	F	Y	P	L	.	.	.	.	.	.	.	.	.	.	.	.	T	H	N	L	H	Q	D	G	I	L	R	T	S	V	A	F
Query Conservation											.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.														.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		E	E	A	Y	N	A	V	D	A	M	L	V	H	H	K	F	G	E	A	G	C	A	I	I	I	E	E	F	L	E	G	K	.	E	I	S	F	F	T	L	V	D	G	S	N	P	V	I	L	G	V	A	Q	D	Y	K	T	I	G	D	N	N	K	G	P	N	T	G	G	M	G	S	Y	S	K	P	N	I	I	T
Template Known Secondary structure													T	S		T	T	G	G	G	G	S	S									S		.										S	S																G	G	G						S		S						T	T	S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																										.	.																																		.
Query SS confidence																										.	.																																		.
Query Sequence		P	Q	A	N	A	Q	Q	Q	A	Q	A	E	E	M	L	S	A	I	M	Q	E	L	G	Y	.	.	V	G	V	M	A	M	E	C	F	V	T	P	Q	G	L	L	I	N	E	L	A	P	R	V	H	N	S	G	H	W	T	Q	N	.	G	A	S	I	S	Q	F	E	L	H	L	R	A	I	T	D	L	P	L	P
Query Conservation																										.	.																																		.
Alig confidence																										.	.																																		.
Template Conservation
Template Sequence		Q	E	M	E	H	I	I	I	Q	K	I	I	Y	P	T	I	K	A	M	F	N	M	N	I	Q	F	R	G	L	L	F	A	G	I	I	I	K	K	N	E	P	K	L	L	E	Y	N	V	R	F	G	D	P	E	T	Q	S	I	L	P	R	L	N	S	D	F	L	K	L	L	S	L	T	A	K	G	K	L	G	N
Template Known Secondary structure												T											T	T															T	T									S	S			T	T						G	G	G	B		S												T			S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.															.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.							.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		Q	P	V	V	N	N	P	S	V	M	I	N	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	D	V	N	Y	D	W	L	K	L	P	L	V	H	L	H	W	Y	.	.	.	.	.	.	D	K	E	V	R	P	G	R	K	V	G	H	L	N	L	T	D	S	D	T	S	R	L	T	A	T	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	V	E	L	S	K	K	A	A	L	C	V	V	V	A	S	R	G	Y	P	G	E	Y	K	K	N	S	I	I	N	G	I	E	N	I	E	K	L	P	N	V	Q	L	L	H	A	G	T	R	R	E	G	N	N	W	V	S	D	S	G	R	V	I	N	V	V	A	Q	G	E	N	L	A	S	A	K	H	Q	A
Template Known Secondary structure						B		S											T	T	T	T	S	S			S	S				B	S						T		S	S						S	S					T	T						S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.				.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		E	A	L	I	P	L	L	P	P	E	.	.	.	Y	A	S	G	V
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		Y	A	A	L	D	L	L	D	W	P	D	G	I	Y	R	Y	D	I
Template Known Secondary structure						T	T		B		T	T					S		T
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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