Job Description P09029 Confidence 100.00% Date Thu Jan 5 11:01:47 GMT 2012 Rank 9 Aligned Residues 348 % Identity 15% Template c3g8cB_ PDB info PDB header:ligase Chain: B: PDB Molecule:biotin carboxylase; PDBTitle: crystal stucture of biotin carboxylase in complex with2 biotin, bicarbonate, adp and mg ion Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.																														.	.	.	.	.
Predicted Secondary structure																																						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence																																						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		M	K	Q	V	C	V	L	G	N	G	Q	L	G	R	M	L	R	Q	A	G	E	P	L	G	I	A	V	W	P	V	G	L	D	A	E	P	.	.	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	T	A	.
Query Conservation																																						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence																																						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		L	D	K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P	G
Template Known Secondary structure			S																						T									G	G	G	T	T							S	S								S	S	G	G	G	T	T	T													T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
					49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.																																																			.	.	.
Query SS confidence		.	.	.																																																			.	.	.
Query Sequence		.	.	.	E	I	E	R	W	P	E	T	A	L	T	R	E	L	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T	A	P	W	Q	.	.	.	L	L	A	E	R	S	E	W	P	A	V	F	D	R	L	G	E	L	A	I	V	K	R	R
Query Conservation		.	.	.																																																			.	.	.
Alig confidence		.	.	.																																																			.	.	.
Template Conservation
Template Sequence		Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A	S
Template Known Secondary structure		S	S	T	T	T	T											T	T				S	S	S										S												T			B			B		S	S				S														S	S						S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.											.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																																						.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.																																						.
Query Sequence		T	G	G	Y	D	G	R	G	Q	W	R	L	R	A	N	E	T	E	Q	L	P	A	E	C	.	.	.	.	.	.	.	.	.	.	Y	G	E	C	I	V	E	Q	G	I	N	F	S	G	E	V	S	L	V	G	A	R	G	F	D	G	S	T	V	F	Y	P	L	T	H	N	L	.	H	Q	D	G	I	L	R	T
Query Conservation																										.	.	.	.	.	.	.	.	.	.																																						.
Alig confidence			.																							.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation			.
Template Sequence		G	.	G	G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	E	R	D	C	S	M	Q	R	R	H	Q	K	V	V
Template Known Secondary structure		S	.			S	S								S																				S											S	S												T	T	S															T	T
Template Predicted Secondary structure			.
Template SS confidence
		162		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		192	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		S	V	A	F	P	Q	.	A	N	A	Q	Q	Q	A	Q	A	E	E	M	L	S	A	I	M	Q	E	L	G	Y	V	G	V	M	A	M	E	C	F	V	T	P	Q	G	L	L	I	N	E	L	A	P	R	V	H	N	S	G	H	W	T	Q	N	G	A	S	I	S	Q	F	E	L	H	L	R	A	I	T	D	L	P
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	G	Y	R	G	A	G	T	F	E	F	L	F	E	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	V	T	E	M	I	T	G	V	D	L	I	K	E	Q	L	R	I	A	A	G	Q	P
Template Known Secondary structure					S		T	T																					T													T	T										S			T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		271	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.									290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.									.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure											.	.	.	.											.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.											.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		L	P	Q	P	V	V	N	N	P	.	.	.	.	S	V	M	I	N	L	I	G	S	D	.	.	.	.	.	.	.	.	V	N	Y	D	W	L	K	L	P	L	V	H	L	H	W	Y	D	K	E	V	R	P	G	R	K	V	.	.	.	.	.	.	.	.	G	H	L	N	L	T	D	S	D	T	S	R	L	T	A
Query Conservation											.	.	.	.											.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.											.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	I	K	Q	E	E	V	H	V	R	G	H	A	V	E	C	R	I	N	A	E	D	P	N	T	F	L	P	S	P	G	K	I	T	R	F	H	A	P	G	G	F	G	V	R	W	E	S	H	I	Y	A	G	Y	T	V	P	P	Y	Y	D	S	M	I	G	K	L	I	C	Y	G	E	N	R	D	V	A	I	A
Template Known Secondary structure			S	S		G	G	G					S										B		T	T	T			B													S	T	T									T	T					T	T	S		S										S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		331	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		T	L	E	A	L	I	P	L	L	P	P	E	.	Y	A	S	G	V	I	W
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		R	M	K	N	A	L	Q	E	L	I	I	D	G	I	K	T	N	V	D	L
Template Known Secondary structure														S	S			S
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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