Job Description P09029 Confidence 99.96% Date Thu Jan 5 11:01:47 GMT 2012 Rank 52 Aligned Residues 238 % Identity 11% Template c3df7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative atp-grasp superfamily protein; PDBTitle: crystal structure of a putative atp-grasp superfamily2 protein from archaeoglobus fulgidus Resolution 1.87 Å

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		2	.	.	.	.					.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																											.	.	.	.	.	.	50	.
Predicted Secondary structure							.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	V	C	V	.	.	.	.	L	G	N	G	Q	L	G	R	M	L	R	Q	A	G	E	P	L	G	I	A	V	W	P	V	G	L	D	A	E	P	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	T	A	E	I	E
Query Conservation							.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.														.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		L	K	L	F	L	F	E	F	A	T	C	G	E	R	I	E	D	S	T	A	V	E	.	G	L	A	X	F	K	S	A	F	D	G	F	K	N	Y	Y	E	I	T	G	F	V	R	P	E	F	S	C	L	F	T	L	P	V	D	S	X	D	S	X	E	K	Y	L	E	K	S	D	A	F	L	I	I	A	P	E	D
Template Known Secondary structure													S	S										.													T	T	T	S						B		G	G	G	T	T	T	S	S	S		B			G	G	G						T	T		S									G
Template Predicted Secondary structure																								.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		52	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		R	W	P	E	T	A	L	T	R	E	L	.	.	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T	A	P	W	Q	L	L	A	E	R	S	E	W	P	A	V	F	D	R	L	G	E	L	A	I	V	K	R	R	T	G	G	Y	D	G	R
Query Conservation													.	.
Alig confidence													.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	L	L	Y	T	L	T	K	K	A	E	K	Y	C	E	N	L	G	S	S	S	R	A	I	A	V	T	S	D	K	W	E	L	Y	K	K	L	.	R	G	E	V	Q	V	P	Q	T	S	L	.	.	.	.	.	.	.	.	.	.	.	.	R	P	L	D	C	K	F	I	I	K	P	R	T	A	C	I	G	F
Template Known Secondary structure		G	G											T	T	S			S	S										T	S									.	T	T	T	S							S	.	.	.	.	.	.	.	.	.	.	.	.	S			S	S	S						S	S				B
Template Predicted Secondary structure																																								.												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.													130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	W	R	L	R	A	N	E	T	E	Q	L	P	A	E	C	Y	G	E	C	I	V	E	Q	G	I	N	F	S	G	E	V	S	L	V	G	A	R	G	F	D	G	S	T	V	F	Y	P	L	T	H	N	L	H	Q	D	G	I	L	R	T	S	V	A	F	P	Q	A	N	A	Q	Q	Q	A	Q	A	E	E	M
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.											.													.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.											.													.	.
Template Sequence		S	D	E	V	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	A	Q	E	F	I	E	G	I	.	N	L	S	V	S	L	A	V	G	E	D	V	.	.	K	C	L	S	V	N	E	Q	I	I	N	N	F	R	Y	A	G	A	V	V	P	A	R	I	S	D	E	V	K	R	E	V	V	E	E
Template Known Secondary structure			S	S			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.									S		.									S	S	S		.	.												T	T								S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.											.													.	.
Template SS confidence
		152	.	.	.	.	.	.														.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	S	A	I	M	Q	E	L	G	.	Y	V	G	V	M	A	M	E	C	F	V	T	P	Q	G	L	L	I	N	E	L	A	P	R	V	H	N	S	G	H	W	T	Q	N	G	A	S	I	S	Q	F	E	L	H	L	R	A	I	T	D	L	P
Query Conservation											.
Alig confidence											.													.
Template Conservation																								.
Template Sequence		A	V	R	A	V	E	C	V	E	G	L	N	G	Y	V	G	V	D	I	V	Y	S	.	D	Q	P	Y	V	I	E	I	N	A	R	L	T	T	P	V	V	A	F	S	R	A	Y	G	A	S	V	A	D	L	L	A	G	G	E	V	K	H	V
Template Known Secondary structure							T	T	S	T	T												S	.	S	S								S	S			G	G	G	G	G						S								T	T
Template Predicted Secondary structure																								.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions