Job Description P09029 Confidence 100.00% Date Thu Jan 5 11:01:47 GMT 2012 Rank 26 Aligned Residues 345 % Identity 14% Template c2qk4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:trifunctional purine biosynthetic protein adenosine-3; PDBTitle: human glycinamide ribonucleotide synthetase Resolution 2.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																						.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																								.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query SS confidence																								.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query Sequence		M	K	Q	V	C	V	L	G	N	G	Q	L	G	R	M	L	R	Q	A	G	E	P	.	.	L	G	I	A	V	W	P	V	G	L	D	A	E	P	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	T	A	E	I	E	R	W	P	.	.	.
Query Conservation																								.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Alig confidence																								.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation
Template Sequence		A	A	R	V	L	I	I	G	S	G	G	R	E	H	T	L	A	W	K	L	A	Q	S	H	H	V	K	Q	V	L	V	A	P	G	N	A	G	T	A	C	S	E	K	I	S	N	T	A	I	S	I	S	D	H	T	A	L	A	Q	F	C	K	E	K	K	I	E	F	V	V	V	G	P	E	A	P	L	A	A	G
Template Known Secondary structure		S									S											T	T		T	T											G	G	G	S	B	S	S	S								S	S													T								S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	A	L	T	R	E	L	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T	A	P	W	Q	L	L	A	E	R	S	E	W	P	A	V	F	D	R	L	G	E	L	A	I	V	K	R	R	T	G	G	Y	D	G	R	G	Q	W	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	G	N	L	R	S	A	G	V	Q	C	F	G	P	T	A	E	A	A	Q	L	E	S	S	K	R	F	A	K	E	F	M	D	R	H	G	I	P	T	A	Q	W	K	A	F	T	K	P	E	E	A	C	S	F	I	L	S	A	D	F	P	A	L	V	V	K	A	S	G	L	K	G	V	I	V	A	K	S	K
Template Known Secondary structure									T	T					S			T	T	T	T					B											T	T			B							S	S												S	S								S	B								S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																		.	.	.	.											.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.											.	.	.	.	.	.	.	.
Query Sequence		R	A	N	E	T	E	Q	L	P	A	E	C	Y	G	E	C	I	V	E	Q	G	I	N	F	S	G	E	V	S	L	V	G	A	R	G	F	D	G	S	T	V	F	Y	P	L	T	H	N	.	.	.	.	L	H	Q	D	G	I	L	R	T	S	.	.	.	.	.	.	.	.	V	A	F	P	Q	A	N	A	Q	Q
Query Conservation																																																		.	.	.	.											.	.	.	.	.	.	.	.
Alig confidence																											.																							.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		E	E	A	C	K	A	V	Q	E	I	M	Q	E	E	T	I	V	I	E	E	L	L	D	G	E	.	E	V	S	C	L	C	F	T	D	G	K	T	V	A	P	M	P	P	A	Q	D	H	K	R	L	L	E	G	D	G	G	P	N	T	G	G	M	G	A	Y	C	P	A	P	Q	V	S	N	D	L	L	L	K	I
Template Known Secondary structure												T	T												S		.										S	S								B								T	T	T													S		T	T
Template Predicted Secondary structure																											.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.
Predicted Secondary structure																			.	.																														.																													.	.
Query SS confidence																			.	.																														.																													.	.
Query Sequence		Q	A	Q	A	E	E	M	L	S	A	I	M	Q	E	L	G	Y	.	.	V	G	V	M	A	M	E	C	F	V	T	P	Q	G	L	L	I	N	E	L	A	P	R	V	H	N	S	G	H	.	W	T	Q	N	G	A	S	I	S	Q	F	E	L	H	L	R	A	I	T	D	L	P	L	P	Q	P	V	V	.	.	N
Query Conservation																			.	.																														.																													.	.
Alig confidence																			.	.																														.																													.	.
Template Conservation
Template Sequence		K	D	T	V	L	Q	R	T	V	D	G	M	Q	Q	E	G	T	P	Y	T	G	I	L	Y	A	G	I	M	L	T	K	N	G	P	K	V	L	E	F	N	C	R	F	G	D	P	E	C	Q	V	I	L	P	L	L	K	S	D	L	Y	E	V	I	Q	S	T	L	D	G	L	L	C	T	S	L	P	V	W	L	E
Template Known Secondary structure					T											T	T															T	T									S	S			T	T	T					G	G	G	B		S											T	T		G	G	G	G				B		T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.													.	.	.	.	.	.	.	300	.	.	.	.							.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query Sequence		N	P	S	V	M	I	N	L	I	G	S	D	V	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	D	W	L	K	L	P	L	V	H	L	H	W	.	.	.	.	.	.	Y	D	K	E	V	R	P	G	R	K	V	G	H	L	N	L	T	D	S	D	T	S	R	L	T	A	T	L	E	A	L	I	P	L	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation
Template Sequence		N	H	T	A	L	T	V	V	M	A	S	K	G	Y	P	G	D	Y	T	K	G	V	E	I	T	G	F	P	E	A	Q	A	L	G	L	E	V	F	H	A	G	T	A	L	K	N	G	K	V	V	T	H	G	G	R	V	L	A	V	T	A	I	R	E	N	L	I	S	A	L	E	E	A	K	K	G	L	A	A	I
Template Known Secondary structure		T											T	T	T	T	S	S				S		B		B								T	T						S	S					T	T						S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	E	Y	A	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	E	G	A	I	Y
Template Known Secondary structure		B		T	T		B
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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