Job Description P09029 Confidence 100.00% Date Thu Jan 5 11:01:47 GMT 2012 Rank 22 Aligned Residues 345 % Identity 14% Template c2hjwA_ PDB info PDB header:ligase Chain: A: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: crystal structure of the bc domain of acc2 Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.										.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	Q	V	C	V	L	G	N	G	Q	L	G	R	M	L	R	Q	A	G	E	P	L	.	.	.	.	.	.	.	.	.	G	I	A	V	W	P	V	.	.	.	.	G	L	D	A	E	P	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	K	V	L	I	A	N	N	G	I	A	A	V	K	C	M	R	S	I	R	R	W	A	Y	E	M	F	R	N	E	R	A	I	R	F	V	V	M	V	T	P	E	D	L	K	A	N	A	E	Y	I	K	M	A	D	H	Y	V	P	V	P	G	G	P	N	N	N	N	Y	A	N	V	E	L	I	V	D	I	A
Template Known Secondary structure																														S		T	T	S	S													T	T							S	S								S	S	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
							44	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.						.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.						.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	S	V	I	T	A	.	.	.	.	E	I	E	R	W	P	E	T	A	L	T	R	E	L	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T	A	P	W	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.						.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.						.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	I	P	V	Q	A	V	W	A	G	W	G	H	A	S	E	N	P	K	L	P	E	L	L	C	K	N	G	V	A	F	L	G	P	P	S	E	A	M	W	A	L	G	D	K	I	A	S	T	V	V	A	Q	T	L	Q	V	P	T	L	P	W	S	G	S	G	L	T	V	E	W	Q	G	K	R	I	S	V	P
Template Known Secondary structure				T	T		S						S	S	T	T	T	T		T									T	T				S	S								T	T		S											T	T			B			B	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
									99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																														.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																														.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	L	L	A	E	R	S	E	W	P	A	V	F	D	R	L	G	E	L	A	I	V	K	R	R	T	G	G	Y	D	G	R	G	Q	W	R	L	R	A	N	E	T	E	Q	L	P	.	.	.	.	.	.	A	E	C	Y	G	E	C	I	V	E	Q	G	I	N	F	S	G	E	V	S	L	V
Query Conservation		.	.	.	.	.	.	.																																														.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																										.																				.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		E	D	V	Y	D	K	G	C	V	K	D	V	D	E	G	L	E	A	A	E	R	I	G	F	P	L	M	I	K	A	S	E	.	G	G	G	G	K	G	I	R	K	A	E	S	A	E	D	F	P	I	L	F	R	Q	V	Q	S	E	I	P	G	S	P	I	F	L	M	K	L	A	Q	H	A	R	H	L	E	V	Q
Template Known Secondary structure						T	T	S	S			S													S	S						T	T	.			S	S		S						S	T	T	T												S	T	T											S
Template Predicted Secondary structure																																		.
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.		.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.
Predicted Secondary structure																		.																.																																						.
Query SS confidence																		.																.																																						.
Query Sequence		G	A	R	G	F	D	G	S	T	V	F	Y	P	L	T	H	.	N	L	H	Q	D	G	I	L	R	T	S	V	A	F	P	.	Q	A	N	A	Q	Q	Q	A	Q	A	E	E	M	L	S	A	I	M	Q	E	L	G	Y	V	G	V	M	A	M	E	C	F	V	T	P	Q	G	.	L	L	I	N	E	L	A	P	R
Query Conservation																		.																.																																						.
Alig confidence																		.																.																																						.
Template Conservation
Template Sequence		I	L	A	D	Q	Y	G	N	A	V	S	L	F	G	R	D	C	S	I	Q	R	R	H	Q	K	I	V	E	E	A	P	A	T	I	A	P	L	A	I	F	E	F	M	E	Q	C	A	I	R	L	A	K	T	V	G	Y	V	S	A	G	T	V	E	Y	L	Y	S	Q	D	G	S	F	H	F	L	E	L	N	P	R
Template Known Secondary structure						S	S	S														S	S	S	S							S			S	S																			T	T													S	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.							.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.												.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	N	S	G	H	W	T	Q	N	G	A	S	I	S	Q	F	E	L	H	L	R	A	I	T	D	L	P	L	P	Q	P	.	.	.	.	.	.	V	V	N	N	P	S	V	M	I	N	L	I	G	S	D	V	N	Y	.	.	.	.	.	.	.	.	.	.	.	D	W	L	K	L	P	L	V	H	L	H	W	Y
Query Conservation																																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	V	E	H	P	C	T	E	M	I	A	D	V	N	L	P	A	A	Q	L	Q	I	A	M	G	V	P	L	H	R	L	K	D	I	R	L	L	Y	G	E	S	P	W	G	V	T	P	I	S	F	E	T	P	S	N	P	P	L	A	R	G	H	V	I	A	A	R	I	T	S	E	S	G	T	V	Q	E	L	N
Template Known Secondary structure				T	T	T								T												T	T			G	G	G								T	T			T	T							S	S	S		S	S						S													S
Template Predicted Secondary structure
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
		306	.	.	.	310	.	.	.	.									.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																													.	.
Query SS confidence											.	.	.	.	.	.	.	.																													.	.
Query Sequence		D	K	E	V	R	P	G	R	K	.	.	.	.	.	.	.	.	V	G	H	L	N	L	T	D	S	D	T	S	R	L	T	A	T	L	E	A	L	I	P	L	L	P	P	E	.	.	Y	A	S	G	V	I	W
Query Conservation											.	.	.	.	.	.	.	.																													.	.
Alig confidence		.	.	.							.	.	.	.	.	.	.	.																													.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	F	R	S	S	K	N	V	W	G	Y	F	S	V	Q	F	G	H	C	F	S	W	G	E	N	R	E	E	A	I	S	N	M	V	V	A	L	K	E	L	S	I	R	G	D	F	R	T	T	V	E	Y
Template Known Secondary structure		.	.	.		S	S		T	T																	S	S																		S	G	G	G	T	T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.