Job Description P09029 Confidence 96.79% Date Thu Jan 5 11:01:47 GMT 2012 Rank 108 Aligned Residues 94 % Identity 14% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																		.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Query SS confidence																.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Query Sequence		M	K	Q	V	C	V	L	G	N	G	Q	L	G	R	.	M	L	R	Q	A	G	E	P	L	G	I	A	V	W	P	V	G	L	D	A	E	P	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	T	A	E	.	.	.	I	E	R	W	P	E	T	A	L	T
Query Conservation																.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Alig confidence																.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation
Template Sequence		V	R	H	I	H	F	V	G	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	S	A	I	S	A	D	N	P	E	I	V	A	A
Template Known Secondary structure									T	T	T	S	T	T											T	T								S	S											T	T					S	S			G	G	G	G	T	T		S						T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	L	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	X	R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y	A	E	A	G	L	D	P
Template Known Secondary structure				T	T															T	T	S							S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions