Job Description P09029 Confidence 100.00% Date Thu Jan 5 11:01:47 GMT 2012 Rank 13 Aligned Residues 348 % Identity 16% Template c1ulzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.																													.	.	.	.	.
Predicted Secondary structure																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Query SS confidence																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Query Sequence		M	K	Q	V	C	V	L	G	N	G	Q	L	G	R	M	L	R	Q	A	G	E	P	L	G	I	A	V	W	P	V	.	.	G	L	D	A	E	P	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	T	A	.	.
Query Conservation																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Alig confidence																																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation
Template Sequence		V	N	K	V	L	V	A	N	R	G	E	I	A	V	R	I	I	R	A	C	K	E	L	G	I	P	T	V	A	I	Y	N	E	V	E	S	T	A	R	H	V	K	L	A	D	E	A	Y	M	I	G	T	D	P	L	D	T	Y	L	N	K	Q	R	I	I	N	L	A	L	E	V	G	A	D	A	I	H	P	G	Y
Template Known Secondary structure			S	S																					T									G	G	G	T	T							S	S							S	S	T	T																T	T								S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
				49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure		.	.																																																	.	.
Query SS confidence		.	.																																																	.	.
Query Sequence		.	.	E	I	E	R	W	P	E	T	A	L	T	R	E	L	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T	A	P	.	.	W	Q	L	L	A	E	R	S	E	W	P	A	V	F	D	R	L	G	E	L	A	I	V	K	R	R	T	G
Query Conservation		.	.																																																	.	.
Alig confidence		.	.																																																	.	.																												.
Template Conservation																																																																																	.
Template Sequence		G	F	L	A	E	N	A	E	F	A	K	M	C	E	E	A	G	I	T	F	I	G	P	H	W	K	V	I	E	L	M	G	D	K	A	R	S	K	E	V	M	K	K	A	G	V	P	V	V	P	G	S	D	G	V	L	K	S	L	E	E	A	K	A	L	A	R	E	I	G	Y	P	V	L	L	K	A	T	A	.
Template Known Secondary structure		S	T	T	T	T											T	T				S	S	S										S											T	T			B			B		S	S	S																S	S							S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.											.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																																							.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.																																							.
Query Sequence		G	Y	D	G	R	G	Q	W	R	L	R	A	N	E	T	E	Q	L	P	A	E	.	.	.	.	.	.	.	.	.	.	C	Y	G	E	C	I	V	E	Q	G	I	N	F	S	G	E	V	S	L	V	G	A	R	G	F	D	G	S	T	V	F	Y	P	L	T	H	N	L	.	H	Q	D	G	I	L	R	T	S	V
Query Conservation																							.	.	.	.	.	.	.	.	.	.																																							.
Alig confidence																							.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation
Template Sequence		G	G	G	G	R	G	I	R	I	C	R	N	E	E	E	L	V	K	N	Y	E	Q	A	S	R	E	A	E	K	A	F	G	R	G	D	L	L	L	E	K	F	I	E	N	P	K	H	I	E	Y	Q	V	L	G	D	K	H	G	N	V	I	H	L	G	E	R	D	C	S	I	Q	R	R	N	Q	K	L	V	E	I
Template Known Secondary structure		S	S	S			S					S	S																		T	T	S												S												T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		194	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure						.																																					.
Query SS confidence						.																																					.
Query Sequence		A	F	P	Q	.	A	N	A	Q	Q	Q	A	Q	A	E	E	M	L	S	A	I	M	Q	E	L	G	Y	V	G	V	M	A	M	E	C	F	V	T	P	Q	G	.	L	L	I	N	E	L	A	P	R	V	H	N	S	G	H	W	T	Q	N	G	A	S	I	S	Q	F	E	L	H	L	R	A	I	T	D	L	P	L
Query Conservation						.																																					.
Alig confidence						.																																					.
Template Conservation
Template Sequence		A	P	S	L	I	L	T	P	E	K	R	E	Y	Y	G	N	I	V	T	K	A	A	K	E	I	G	Y	Y	N	A	G	T	M	E	F	I	A	D	Q	E	G	N	L	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	V	S	E	M	V	T	G	I	D	I	V	K	W	Q	I	K	I	A	A	G	E	P	L
Template Known Secondary structure			S		S	S																				T	T													T	T											S			T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		272	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.										290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.									.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure										.	.	.	.											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		P	Q	P	V	V	N	N	P	.	.	.	.	S	V	M	I	N	L	I	G	S	D	.	.	.	.	.	.	.	.	.	V	N	Y	D	W	L	K	L	P	L	V	H	L	H	W	Y	D	K	E	V	R	P	G	R	.	.	.	.	.	.	.	.	K	V	G	H	L	N	L	T	D	S	D	T	S	R	L	T	A
Query Conservation										.	.	.	.											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.											.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	K	Q	E	D	V	K	F	N	G	Y	A	I	E	C	R	I	N	A	E	D	P	K	K	N	F	A	P	S	T	R	V	I	E	R	Y	Y	V	P	G	G	F	G	I	R	V	E	H	A	A	A	R	G	F	E	V	T	P	Y	Y	D	S	M	I	A	K	L	I	T	W	A	P	T	W	D	E	A	V	E
Template Known Secondary structure					G	G	G					S									S			G	G	G	T	T					S	B			S						S	T	T									T	T		B			S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		331	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		T	L	E	A	L	I	P	L	L	P	P	E	.	Y	A	S	G	V	I	W
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		R	M	R	A	A	L	E	T	Y	E	I	T	G	V	K	T	T	I	P	L
Template Known Secondary structure									T					S	S			S
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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