Return to main results Retrieve Phyre Job Id

Job DescriptionP19769
Confidence71.57%DateThu Jan 5 11:37:35 GMT 2012
Rank282Aligned Residues29
% Identity21%Templated1d5ya1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1..... ...10.........20.........
Predicted Secondary structure 
.




Query SS confidence 





.






















Query Sequence  MKVLNE. LRQFYPLDELLRAAEIPRSTFYY
Query Conservation     
  .      
      






 
 
Alig confidence 





.






















Template Conservation    

       
 
  

     
   
 
Template Sequence  LIWLEGHLDQPLSLDNVAAKAGYSKWHLQR
Template Known Secondary structure  TTSSSS


TTTSS
Template Predicted Secondary structure 








Template SS confidence 





























   11........20.........30.........40
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions