Job Description P19769 Confidence 99.27% Date Thu Jan 5 11:37:35 GMT 2012 Rank 13 Aligned Residues 128 % Identity 16% Template d1c6va_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 3.00

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	V	T	D	V	T	E	F	A	V	N	G	R	K	L	Y	L	S	P	V	I	D	L	F	N	N	E	V	I	S	Y	S	L	S	E	R	P	V	M	N	M	V	E	N	M	L	D	Q	A	F	K	K	L	N	P	H	E	H	P	V	L	H	S	D	Q	G	W	Q	Y	R	M	R	R	Y	Q	N	I	L	K
Query Conservation
Alig confidence									.	.	.	.																																				.	.	.	.
Template Conservation									.	.	.	.																																				.	.	.	.
Template Sequence		T	W	Q	M	D	C	T	.	.	.	.	H	L	E	G	K	I	V	I	V	A	V	H	V	A	S	G	F	I	E	A	E	V	I	P	Q	E	T	G	R	Q	T	A	L	F	L	.	.	.	.	L	K	L	A	G	R	W	P	I	T	H	L	H	T	D	N	G	A	N	F	A	S	Q	E	V	K	M	V	A	W
Template Known Secondary structure									.	.	.	.			T	T									T	T	S									S	S		S									.	.	.	.					T	T	S											S	S	T	T	S	S
Template Predicted Secondary structure									.	.	.	.																																				.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	G	I	K	Q	S	M	S	R	K	G	N	C	L	D	N	A	V	V	E	C	F	F	G	T	L	K	S	E	C	F	Y	L	D	E	F	S	N	I	S	E	L	K	D	A	V	T	E	Y	I	E	Y	Y	N	S	R	R	I	S	L	K	L	K	G	L	T	P	I	E
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.												.	.																								.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.												.	.																								.
Template Sequence		W	A	G	I	E	H	T	F	G	.	.	.	.	.	.	.	.	.	.	.	E	A	M	N	H	H	L	K	N	Q	I	.	.	D	R	I	R	E	Q	A	N	S	V	E	T	I	V	L	M	A	V	H	C	M	N	H	.	K	R	R	G	G	I	G	D	M	T	P	A	E
Template Known Secondary structure				T							.	.	.	.	.	.	.	.	.	.	.			T	T	T							.	.		T	T	T	T	S	S	S															S	.				S	S	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.												.	.																								.
Template SS confidence
		132	.	.	.	.	.	.	.	140												.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions