 |
Job Description | P19769 | Confidence | 80.07% | Date | Thu Jan 5 11:37:35 GMT 2012 |
Rank | 181 | Aligned Residues | 53 |
% Identity | 11% | Template | c3mklB_ |
PDB info |
PDB header:transcription regulator | Chain: B: PDB Molecule:hth-type transcriptional regulator gadx; |
PDBTitle: crystal structure of dna-binding transcriptional dual regulator from2 escherichia coli k-12
|
Resolution | 2.15 Å |
|
 |
  |   |
1 | . | . | . | . | . | |
. | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | V | L | N | E | . |
L | R | Q | F | Y | P | L | D | E | L | L | R | A | A | E | I | P | R | S | T | F | Y | Y | H | L | K | A | L | S | K | P | D | K | Y | A | D | V | K | K | R | I | S | E | I | Y | H | E |
Query Conservation |   |
  |   |   |
|   |   | . |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
C | T | V | I | N | N | N | I | A | H | E | W | T | L | A | R | I | A | S | E | L | L | X | S | P | S | L | L | K | K | K | L | R | E | E | E | T | S | Y | S | Q | L | L | T | E | C | R | X | Q | R | A | L | Q | L |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | T | T | S |
|
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|