 |
Job Description | P19769 | Confidence | 81.69% | Date | Thu Jan 5 11:37:35 GMT 2012 |
Rank | 147 | Aligned Residues | 42 |
% Identity | 12% | Template | c2l8nA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:transcriptional repressor cytr; |
PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna
|
Resolution | UNK |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | D | E | L | L | R | A | A | E | I | P | R | S | T | F | Y | Y | H | L | K | A | L | S | K | P | D | K | Y | A | D | V | K | K | R | I | S | E | I | Y | H | E | N | R |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |   |
|
|
|   |   |
|
|
|
|
|
|
|   |   |   | . | . |   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|
|
Template Sequence |   |
T | M | K | D | V | A | L | K | A | K | V | S | T | A | T | V | S | R | A | L | M | N | P | D | . |
. |
K | V | S | Q | A | T | R | N | R | V | E | K | A | A | R | E | V | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | T | T | T |
|
|
| . | . |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|