Job Description P19769 Confidence 61.46% Date Thu Jan 5 11:37:35 GMT 2012 Rank 325 Aligned Residues 53 % Identity 19% Template c1iufA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:centromere abp1 protein; PDBTitle: low resolution solution structure of the two dna-binding2 domains in schizosaccharomyces pombe abp1 protein Resolution UNK

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		1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.																	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure												.	.	.											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	L	N	E	L	R	Q	F	.	.	.	Y	P	L	D	E	L	L	R	A	A	.	.	.	.	.	.	E	I	P	R	S	T	F	Y	Y	H	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	S	K	P	D	K	Y	A	D	V	K	K	R	I	S	E	I	Y	H	E
Query Conservation												.	.	.											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	R	H	Y	F	F	Q	L	Q	N	R	S	G	Q	Q	D	L	I	E	W	F	R	E	K	F	G	K	D	I	S	Q	P	S	V	S	Q	I	L	S	S	K	Y	S	Y	L	D	N	T	V	E	K	P	W	D	V	K	R	N	R	P	P	K	Y	P	L	L	E	A	A	L	F	E	W	Q	V	Q
Template Known Secondary structure										S	S	S	S																S	S			S	S	S	S	T	T										T	T	T	S		S	S	S	S	S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions