Return to main results Retrieve Phyre Job Id

Job DescriptionQ47538
Confidence97.81%DateThu Jan 5 12:36:53 GMT 2012
Rank120Aligned Residues140
% Identity18%Templated1u94a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
Predicted Secondary structure 






























































Query SS confidence 















































































Query Sequence  LESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEKM
Query Conservation 
  


  


 









 
 
      
 
   
                                         
Alig confidence 










































.....................................
Template Conservation 

 
 
  
 
 

 


 
 
         
  

 

 
  .....................................
Template Sequence  LPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTS
STTSSTT

SS

.....................................
Template Predicted Secondary structure 

















.....................................
Template SS confidence 















































































   56...60.........70.........80.........90........
 
   104.....110.........120.........130.........140.........150.........160.... .....170...
Predicted Secondary structure 


























..........
Query SS confidence 




























































. . . . . . . . . .








Query Sequence  QRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTR. . . . . . . . . . DQMQTLLLK
Query Conservation                           

 
  


 

 

   
 







 


    ..........  
   
  
Alig confidence  ....
























































..........








Template Conservation  ....        

     
 
                        





                
        
  
Template Sequence  . . . . LDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEGLAARMMSQAMRKLAG
Template Known Secondary structure  ....

TT

GGG


SST

S
GGG


TT

Template Predicted Secondary structure  ....
























Template SS confidence 















































































   99100.........110.........120.........130.........140.........150.........160.........170....
 
   174.....180.........190 .........200....
Predicted Secondary structure 




..


Query SS confidence 
















. .













Query Sequence  LWQETGKQVLLITHDIE. . EAVFMATELVLLSS
Query Conservation 
    
 


 


   .. 
   



 

  
Alig confidence 
















..













Template Conservation 

      

 
 
   
      
   
 
  
Template Sequence  NLKQSNTLLIFINQTTGGNALKFYASVRLDIRR
Template Known Secondary structure  T


TT
S
S
Template Predicted Secondary structure 















Template SS confidence 
































   181........190.........200.........210...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions