Job Description Q47538 Confidence 100.00% Date Thu Jan 5 12:36:53 GMT 2012 Rank 44 Aligned Residues 207 % Identity 28% Template c2pzfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cystic fibrosis transmembrane conductance regulator; PDBTitle: minimal human cftr first nucleotide binding domain as a head-to-tail2 dimer with delta f508 Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	Q	I	S	H	L	Y	A	D	Y	.	.	G	G	K	P	A	L	E	D	I	N	L	T	L	E	S	G	E	L	L	V	V	L	G	P	S	G	C	G	K	T	T	L	L	N	L	I	A	G	F	V	P	Y	Q	H	G	S	I	Q	L	A	G	K	R	I	E	G	P	G	A	E	R	G	V	V	F	Q	N	E
Query Conservation												.	.
Alig confidence												.	.																																																					.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.
Template Sequence		V	V	M	E	N	V	T	A	F	W	E	E	G	G	T	P	V	L	K	D	I	N	F	K	I	E	R	G	Q	L	L	A	V	A	G	S	T	G	A	G	K	T	S	L	L	M	M	I	M	G	E	L	E	P	S	E	G	K	I	K	H	S	G	R	.	.	.	.	.	.	.	.	I	S	F	C	S	Q	F	S
Template Known Secondary structure											S	S	T	T	S			S										T	T								S	T	T	S	S									T	T	S	S			S								S		.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.									.	.	.	.	460	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		G	L	L	P	W	R	N	V	Q	D	N	V	A	F	G	L	Q	L	A	G	I	E	K	M	Q	R	L	E	I	A	.	.	.	H	Q	M	L	K	K	V	G	L	E	G	A	E	K	R	Y	I	W	Q	L	S	G	G	Q	R	Q	R	V	G	I	A	R	A	L	A	A	N	P	Q	L	L	L	L	D	E	P	F
Query Conservation																																.	.	.
Alig confidence							.																									.	.	.
Template Conservation							.
Template Sequence		W	I	M	P	G	.	T	I	K	E	N	I	I	G	V	S	Y	D	E	Y	R	Y	R	S	V	I	K	A	C	Q	L	E	E	D	I	S	K	F	A	E	K	D	N	I	V	L	G	E	G	G	I	T	L	S	G	G	Q	R	A	R	I	S	L	A	R	A	V	Y	K	D	A	D	L	Y	L	L	D	S	P	F
Template Known Secondary structure					S		.								T	T														T	T						T	T	S	T	T	G	G	G					T	T		T	T	S																S			S						S	T	T
Template Predicted Secondary structure							.
Template SS confidence
		496	.	.	.	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	D	A	F	T	R	D	Q	M	Q	T	L	L	L	K	L	W	Q	E	T	G	K	Q	V	L	L	I	T	H	D	I	E	E	A	V	F	M	A	T	E	L	V	L	L	S	S	G	P	G	R	V	L	E	R	L	P	L	N	F	A	R	R	F
Query Conservation
Alig confidence																							.																.												.	.
Template Conservation																							.																.												.	.
Template Sequence		G	Y	L	D	V	L	T	E	K	E	I	F	E	S	C	V	C	K	L	M	A	.	N	K	T	R	I	L	V	T	S	K	M	E	H	L	K	.	K	A	D	K	I	L	I	L	H	E	G	.	.	S	S	Y	F	Y	G	T	F	S	E	L	Q	N	L
Template Known Secondary structure		T	T	S																	T	T	.	T	S														.			S							T	T	.	.
Template Predicted Secondary structure																							.																.												.	.
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620	.	.			.	.	.	.	.	.	.	630	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions