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Job DescriptionQ47538
Confidence100.00%DateThu Jan 5 12:36:53 GMT 2012
Rank38Aligned Residues216
% Identity32%Templatec2ihyB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:abc transporter, atp-binding protein; PDBTitle: structure of the staphylococcus aureus putative atpase subunit of an2 atp-binding cassette (abc) transporter
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEG. . . . . . . PGAERG
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Template Sequence  LIQLDQIGRXKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKXPGKVGYSAETVRQHIG
Template Known Secondary structure  TTTT


TTSSTTSS

STTB
TTSTT

TT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
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Query Sequence  VVFQN. . EGLLPWRNVQDNVAF. . . . GLQLAGIEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANP
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Template Sequence  FVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGXSAKAQQYIGYLSTGEKQRVXIARALXGQP
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TTSBTTT
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TT
GGGTTSBGGGS
TTT

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Query Sequence  QLLLLDEPFGALDAFTRDQMQTLLLKLWQE. TGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFA
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Template Sequence  QVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAXIYVTHFIEEITANFSKILLLKDG. . QSIQQGAVEDI
Template Known Secondary structure  SSTTTT


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   162.......170.........180.........190.........200.........210.........220 .........230.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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