Job Description Q47538 Confidence 100.00% Date Thu Jan 5 12:36:53 GMT 2012 Rank 55 Aligned Residues 200 % Identity 26% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		L	Q	I	S	H	L	Y	A	D	Y	G	G	K	P	A	L	E	D	I	N	L	T	L	E	S	G	E	L	L	V	V	L	G	P	S	G	C	G	K	T	T	L	L	N	L	I	A	G	F	V	P	Y	Q	H	G	S	I	Q	L	A	G	K	R	I	E	G	P	.	.	.	.	.	G	A	E	R	G	V	V	F
Query Conservation																																																																					.	.	.	.	.
Alig confidence														.	.																																								.														.	.	.	.	.
Template Conservation														.	.																																								.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	R	S	I	I	G	I	V	P
Template Known Secondary structure														.	.	S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S							T	T
Template Predicted Secondary structure														.	.																																								.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	E	G	L	L	P	W	R	N	V	Q	D	N	V	A	F	G	L	Q	L	A	G	I	E	K	M	Q	R	L	E	I	A	H	Q	M	L	K	K	V	G	L	E	G	A	E	K	R	Y	I	W	Q	L	S	G	G	Q	R	Q	R	V	G	I	A	R	A	L	A	A	N	P	Q	L	L	L	L	D	E	P	F
Query Conservation
Alig confidence										.																																	.
Template Conservation										.																																	.
Template Sequence		Q	D	T	I	L	F	N	E	.	T	I	K	Y	N	I	L	Y	G	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	.	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F	D	D	S	K
Template Known Secondary structure		S	S					S	S	.	B							T	T	S	T	T													T	T							.		S	T	T	G	G	G		B																		T			S
Template Predicted Secondary structure										.																																	.
Template SS confidence
		100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	D	A	F	T	R	D	Q	M	Q	T	L	L	L	K	L	W	Q	E	T	G	K	Q	V	L	L	I	T	H	D	I	E	E	A	V	F	M	A	T	E	L	V	L	L	S	S	G	P	G	R	V	L	E	R	L	P	L	N	F	A	R	R
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.								.															.													.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.								.															.													.	.
Template Sequence		T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	.	.	K	I	V	E	K	G	T	H	K	D	L	L	K
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.								.									S	S	G	G	G	S	.	T	T		S							T	T	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.								.															.													.	.
Template SS confidence
		190	.	.	.											.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions