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Job DescriptionQ47538
Confidence99.10%DateThu Jan 5 12:36:53 GMT 2012
Rank82Aligned Residues164
% Identity12%Templatec2dr3A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:upf0273 protein ph0284; PDBTitle: crystal structure of reca superfamily atpase ph0284 from pyrococcus2 horikoshii ot3
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  LESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEKM
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Template Sequence  IPERNVVLLSGGPGTGKTIFSQQFLWNGLKMGEPGIYVALEEHPVQ. . . . . . . . . . . . . . . . VRQNMAQFGWDVKPYEEK
Template Known Secondary structure  TT

TTSSTT

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................TTT


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   20.........30.........40.........50.........60..... ....70.........80...
 
   104.....110.........120.........130.........140.........150....... ..160.........170.........180.
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Query Sequence  QRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFG. . ALDAFTRDQMQTLLLKLWQETGKQ
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Template Sequence  GMFAMVDAFTAGIGKEYEKYIVHDLTDIREFIEVLRQAIRDINAKRVVVDSVTTLYINKPAMARSIILQLKRVLAGTGCT
Template Known Secondary structure  TS
STTTT




S
B
S

SST

TSGGGTTT
GGGTT
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   182..... ..190.........200...
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Query Sequence  VLLITH. . . DIEEAVFMATELVLLS
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Template Sequence  SIFVSQVSGFGPGVEHGVDGIIRLD
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   166...170.........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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