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Job DescriptionQ47538
Confidence98.76%DateThu Jan 5 12:36:53 GMT 2012
Rank87Aligned Residues153
% Identity8%Templatec1wxqA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LVVLGPSGCGKTTLLNLIAGF. . . . . . . . . VPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGI
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Template Sequence  IGVVGKPNVGKSTFFSAATLANVGVTYAITDHPCKELGCSPNPQNYEYRNGLALIPVKXVDVAFLDDLRXASALIHVVDA
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Query Sequence  EKM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QRLEIAHQMLKKVGLE. GAEKRYIWQLSGGQRQRVGIARALAANPQL
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Template Sequence  TGKTDPEGQPTDYHDPVEDIEFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAXHKLNL
Template Known Secondary structure  T

B
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Query Sequence  LLLDEPFGALDAFTRDQMQTLLLKLWQETGKQVLLITHD
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Template Sequence  PEDPTKWSQDDLLAFASEIR. . . . . . RVNKPXVIAANKA
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GGG

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   192.......200.........210. ........220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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