Job Description Q47538 Confidence 96.84% Date Thu Jan 5 12:36:53 GMT 2012 Rank 247 Aligned Residues 158 % Identity 17% Template c1udxA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:the gtp-binding protein obg; PDBTitle: crystal structure of the conserved protein tt1381 from thermus2 thermophilus hb8 Resolution 2.07 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	I	N	L	T	L	E	S	G	E	L	L	V	V	L	G	P	S	G	C	G	K	T	T	L	L	N	L	I	A	G	F	V	P	Y	Q	H	G	S	I	Q	L	A	G	K	R	I	E	G	P	G	A	E	R	G	V	V	F	Q	N	E	G	L	L	P	W	R	N	V	Q	D	N	V	A	F	G	L	Q	L
Query Conservation
Alig confidence																																		.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		R	R	L	R	L	E	L	M	L	I	A	D	V	G	L	V	G	Y	P	N	A	G	K	S	S	L	L	A	A	M	T	R	.	.	.	.	.	.	A	H	P	K	I	A	P	Y	P	F	T	T	L	S	P	N	L	G	V	V	E	V	S	E	E	E	R	F	T	L	A	D	I	P	G	I	I	E	G	A	S	E
Template Known Secondary structure											S		S							G	G	G											S	.	.	.	.	.	.	S								T	T		S	S										S	S	S															G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	E	K	M	Q	R	L	E	I	A	H	Q	M	L	K	K	V	G	L	E	G	A	E	K	R	Y	I	W	Q	L	S	G	G	Q	R	Q	R	V	G	I	A	R	A	L	A	A	N	P	Q	L	L	L	L	D	E	P	F	G	A	L	D	A	F	T	R	D	Q	M	Q	T	L	L	L	K	L	W	Q	E
Query Conservation
Alig confidence																																																									.	.	.	.																			.
Template Conservation																																																									.	.	.	.																			.
Template Sequence		G	K	G	L	G	L	E	F	L	R	H	I	A	R	T	R	V	L	L	Y	V	L	D	A	A	D	E	P	L	K	T	L	E	T	L	R	K	E	V	G	A	Y	D	P	A	L	L	R	R	P	S	L	V	A	L	.	.	.	.	N	K	V	D	L	L	E	E	E	A	V	K	A	L	A	D	A	L	.	A	R
Template Known Secondary structure		S			S									T	S	S	S								T	T	S																							S							.	.	.	.				T	T	S													.		T
Template Predicted Secondary structure																																																									.	.	.	.																			.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.
		178	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	K	Q	V	L	L	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	L	A	V	L	P	V	S
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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