Job Description Q47538 Confidence 97.38% Date Thu Jan 5 12:36:53 GMT 2012 Rank 151 Aligned Residues 106 % Identity 20% Template c1sxjA_ PDB info
PDB header: replicationChain: A: PDB Molecule: activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
29 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
L L V V L G P S G C G K T T L L N L I A G F V P Y Q H G S I Q L A G K R I E G P G A E R G V V F Q N E G L L P W R N V Q D N V A F G L Q L A G I E K M Q R L E I
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
A A M L Y G P P G I G K T T A A H L V A Q E L G Y .
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D I L E Q N A S D V R S K T L L N A G
Template Known Secondary structure
S T T S S T T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T T S T
Template Predicted Secondary structure
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Template SS confidence
348 . 350 . . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 .
109 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
A H Q M L K K V G L E G A E K R Y I W Q L S G G Q R Q R V G I A R A L A A N P Q L L L L D E P F G A L D A F T R D Q M Q T L L L K L W Q E T G K Q V L L I T H D
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
V K N A L D N M S V V G Y F K H Q N L N .
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G K H F V I I M D E V D G M S .
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G G D R G G V G Q L A Q F C R K T S T P L I L I C N E
Template Known Secondary structure
G G G G T T S T T T T T S S . . . . . . . . . . . . . . . . T T S S G G G . . T T S T T S S S
Template Predicted Secondary structure
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Template SS confidence
392 . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
