 |
Job Description | P46853 | Confidence | 96.77% | Date | Wed Jan 25 15:20:56 GMT 2012 |
Rank | 266 | Aligned Residues | 88 |
% Identity | 14% | Template | d2q49a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.19 |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | |
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
| . | . | . | . |
|
|
|  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | C | A | F | I | G | F | . |
G | K | S | T | T | R | Y | H | L | P | Y | V | L | N | R | K | D | S | W | H | V | A | H | I | F | R | R | H | A | K | P | E | E | Q | A | P | I | Y | S | H | I | H | F | T | S | D | L | D | E | V | L | N | D | P | . |
. |
. |
. |
D | V | K | L | V | V | V | C | T | H | A | D | S |
Query Conservation |   |
|
|
|
|
|
|
|   | . |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   | . | . | . | . |   |   |
|   |
|   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
| . |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
| . |   |
|   |   |   |
|
|
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |
Template Sequence |   |
I | R | I | G | L | L | G | A | S | G | Y | T | G | A | E | I | . |
V | R | L | L | A | N | H | P | H | F | Q | V | T | L | M | . |
T | A | D | R | K | A | G | Q | S | M | E | S | V | F | P | H | L | R | A | Q | K | L | P | T | L | V | S | V | K | D | A | D | F | S | T | V | D | A | V | F | C | C | L | P | H | G | T |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
| S | S |  |  |  |  |  |  | . |  |  |  |  |  | T |
| S | S |  |  |  |  |  |  | . |  |
| S | T | T |
| S | S | B | G | G | G | T |
| G | G | G | T | T | S |
|
|
| B |  |  |
| T | T | S |
|
| G | G | G |
| S |  |  |  |  |
|
|
| T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | F | E | Y | A | K | R | A | L | E | A | G | K | N | V | L |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   | . |
|   |   |
|   |   |
|
|
Template Sequence |   |
T | Q | E | I | I | K | E | . |
L | P | T | A | L | K | I | V |
Template Known Secondary structure |   |
S |  |  |  |  |  | T | . | S |
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | |
. | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|