|   |
2 | . | . | . | . | . | . | . | 10 | . | |
|
|
|
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | N | C | A | F | I | G | F | G | . |
. |
. |
. |
K | S | T | T | R | Y | H | L | P | Y | V | L | N | R | . |
K | D | S | W | H | V | A | H | I | F | R | R | H | A | K | P | E | E | Q | A | P | I | Y | S | . |
. |
H | I | H | F | T | S | D | L | D | E | V | L | N | D | P | D | V | K | L | V | V | V | C | T | H |
Query Conservation |   |
  |
|
|
|
|
|
|
|   |
| . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   | . |
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|   |   |   |   |
|
|   |
|   |
|   |
|
|
Template Sequence |   |
P | I | R | V | G | F | V | G | L | T | S | G | K | S | W | V | A | K | T | . |
H | F | L | A | I | Q | Q | L | S | S | Q | F | Q | I | V | A | L | Y | N | P | T | L | K | S | S | L | Q | T | I | E | Q | L | Q | L | K | H | A | T | G | F | D | S | L | E | S | F | A | Q | Y | K | D | I | D | M | I | V | V | S | V | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
|
| S | T | T | S |  |  |  |  | T | . |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  | S |
|  |  |  |  |  |  |
| T | T |
| S |  |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | S | H | F | E | Y | A | K | R | A | L | E | A | G | . |
. |
. |
. |
. |
. |
K | N | V | L | V | E | K | P | F | T | P | T | L | A | Q | A | K | E | L | F | A | L | A | K | S | K | . |
G | L | T | V | T | P | Y | Q | N | R | R | F | D | S | C | F | L | T | A | K | K | A | I | E | S | G | K | L | G | E | I | V |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |   |
| . | . | . | . | . | . |
|   |
|   |   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   | . |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   | . | . |   |   |   |   |   |
Template Sequence |   |
V | P | E | H | Y | E | V | V | K | N | I | L | E | H | S | S | Q | N | L | N | L | R | Y | L | Y | V | E | W | A | L | A | A | S | V | Q | Q | A | E | E | L | Y | S | I | S | Q | Q | R | A | N | L | Q | T | I | I | C | L | Q | G | R | Y | N | S | V | V | G | N | I | L | R | I | Y | E | S | . |
. |
I | A | D | Y | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
| S | S |
|
|  |  |  |  |  | S | S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
. | 170 | . | . | . |
  |
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | E | S | H | F | D | Y | Y | R | P | V | A | E | T | K | P | G | L | P | Q | D | G | A | F | Y | G | L | G | V | H | T | M | D | Q | I | I | S | L | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . |   |
|
|   |
|   |
|   |   |   |   |   |
Template Sequence |   |
F | L | K | F | D | K | Q | G | F | R | F | E | G | F | P | T | F | K | D | A | I | . |
. |
. |
. |
. |
. |
. |
I | L | H | R | L | I | D | A | V | F | R | S |
Template Known Secondary structure |   |
 |
|
|
|
|
|
| T | T |
| S | S | S |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
393 | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 420 | . | . | . | . | . |
  |