 |
Job Description | P46853 | Confidence | 99.73% | Date | Wed Jan 25 15:20:56 GMT 2012 |
Rank | 58 | Aligned Residues | 127 |
% Identity | 20% | Template | d1j5pa4 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 1.90 |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | C | A | F | I | G | F | G | K | S | T | T | R | Y | H | L | P | Y | V | L | N | R | K | D | S | W | H | V | A | H | I | F | R | R | H | A | K | P | E | E | Q | A | P | I | Y | S | H | I | H | F | T | S | D | L | D | E | V | L | N | D | P | D | V | K | L | V | V | V | C | T | H | A | D | S | H | F | E | Y | A |
Query Conservation |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   |
|   |
|
|   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |   |
|   |
|   |
|
Template Sequence |   |
M | T | V | L | I | I | G | M | G | N | I | G | K | . |
. |
. |
. |
. |
K | L | V | E | L | G | N | F | E | K | I | Y | A | Y | D | R | I | S | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | I | P | G | V | V | R | L | D | E | F | Q | V | P | S | D | V | S | T | V | V | E | C | A | S | P | E | A | V | K | E | Y | S |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |  |  |  |  | . | . | . | . | . |  |  |  |  |  | S |
|
| S |  |  |  |  |  |
| S | S |
|
| . | . | . | . | . | . | . | . | . | . |
|
| S | S | S |  |  |
| S | S |
|
|
|
| T | T |
|
|  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | A | L | E | A | G | K | N | V | L | V | E | K | P | F | T | P | T | L | A | Q | A | K | E | . |
L | F | A | L | A | K | S | K | G | L | T | V | T | P | . |
. |
Y | Q | N | R | R | F | D | S | C | F | L | T | A | K | K | A | I | E | S | G | K | L | G |
Query Conservation |   |
  |   |
|
|   |   |
|
|   |
|   |   |
|
|
|   |   |   |
|   |   |
|   |   |   | . |
|   |   |   |
|   |   |   |   |   |   |   |   |
| . | . |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | Q | I | L | K | N | P | V | N | Y | I | I | I | S | T | S | A | F | A | D | E | V | F | R | E | R | F | F | S | E | L | K | N | S | P | A | R | V | F | F | P | S | G | S | M | L | T | V | Y | S | I | L | R | T | L | R | N | L | E | S | K | I | I | F | G |
Template Known Secondary structure |   |
 |  |  | T | T | S | S | S |  |  |  |  |
|
| G | G | G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|