 |
Job Description | P46853 | Confidence | 94.20% | Date | Wed Jan 25 15:20:56 GMT 2012 |
Rank | 459 | Aligned Residues | 88 |
% Identity | 13% | Template | d1c1da1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Aminoacid dehydrogenase-like, C-terminal domain
|
Resolution | 1.25 |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | C | A | F | I | G | F | G | K | S | T | T | R | Y | H | L | P | Y | V | L | N | R | K | D | S | W | H | V | A | H | I | F | R | R | H | A | K | P | E | E | Q | A | P | I | Y | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | I | H | F | T | S | D | L | D | E | V | L | N | D | P | D |
Query Conservation |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |
|   |
|
|   |   |   | . |
|   |   |
|   |   |   | . |
|
| . |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | V | L | V | Q | G | L | G | A | V | G | G | S | L | . |
A | S | L | A | A | E | A | . |
G | A | . |
Q | L | L | V | A | D | T | D | T | E | R | V | A | H | A | V | A | L | G | H | T | A | V | A | L | E | D | V | L | S | T | P | C | D | V | F | A | P | C | A | M | G | G | V | I | T | T | E | V | A | R | T | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |  |  |  |  |  |  | . |  |  |  |  |  |  | T | . | T |
| . |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
| G | G | G | G | G | G |
|
|
| S |  |  |  |  |
| S |
| S |
|
| B |
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |
| . |
|
| . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
. | . | . | . | . | . | . | |
. | . | |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | L | V | V | V | C | T | H | A | D | S | H | F | E | Y | A | K | R | A | L | E | A | G | K | N | V | L | V |
Query Conservation |   |
  |
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
Template Sequence |   |
C | S | V | V | A | G | A | A | N | N | V | I | A | D | E | A | A | S | D | I | L | H | A | R | G | I | L | Y | A |
Template Known Secondary structure |   |
| S |  |  |
|
| S |
| T | T |
| B |
| S |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|