Job Description P46853 Confidence 94.35% Date Wed Jan 25 15:20:56 GMT 2012 Rank 455 Aligned Residues 127 % Identity 8% Template c3tozA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.											50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.															.
Query Sequence		N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	.	.	.	.	.	.	.	.	.	.	H	I	H	F	T	S	D	L	D	E	V	L	N	D	.	P	D	V	K	L	V	V	V	C
Query Conservation																																																.	.	.	.	.	.	.	.	.	.															.
Alig confidence																.								.																								.	.	.	.	.	.	.	.	.	.															.
Template Conservation																.								.
Template Sequence		K	M	T	I	C	G	A	G	G	A	A	T	A	I	.	C	I	Q	A	A	L	D	.	G	V	K	E	I	S	I	F	N	R	K	D	D	F	Y	A	N	A	E	K	T	V	E	K	I	N	S	K	T	D	C	K	A	Q	L	F	D	I	E	D	H	E	Q	L	R	K	E	I	A	E	S	V	I	F	T	N	A
Template Known Secondary structure									S							.								.	T										S	S	T	T															S	S								T	T											T		S
Template Predicted Secondary structure																.								.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		T	H	A	D	S	H	.	.	.	.	.	F	E	Y	A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.																		.	.								.
Template Conservation																														.	.								.
Template Sequence		T	G	V	G	M	K	P	F	E	G	E	T	L	L	P	S	A	D	M	L	R	P	E	L	I	V	S	D	.	.	V	V	Y	K	P	T	K	.	T	R	L	L	E	I	A	E	E	Q	G	C	Q	T	L	N	G	L	G	M	M	L	W	Q	G	A	K	A	F	E
Template Known Secondary structure		S	S	T	T	S	T	T	S	T	T			S				G	G	G			T	T						.	.	S			S	S	S	S	.										T	T						T
Template Predicted Secondary structure																														.	.								.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions