Return to main results Retrieve Phyre Job Id

Job DescriptionP46853
Confidence98.04%DateWed Jan 25 15:20:56 GMT 2012
Rank140Aligned Residues100
% Identity22%Templatec3sthA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 toxoplasma gondii
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30..... ....40.........50.........60....
Predicted Secondary structure 








.









...............
Query SS confidence 


































.




























. . . . . . . . . . . . . . .
Query Sequence  MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIF. RRHAKPEEQAPIYSHIHFTSDLDEVLNDP. . . . . . . . . . . . . . .
Query Conservation 
 






 
      
   
        
    .     
   
             


   ...............
Alig confidence 
















.
















.




























...............
Template Conservation 
 






 
 


 
. 
 
      





         
 
   

  
     
      
 
 
  
      
Template Sequence  MVCKLGINGFGRIGRLV. FRAAMERGDVEVLAINDPFMSLDYMVYLLRYDSVHGHYPGEVSHKDGKLIVGGKAVTVFNEK
Template Known Secondary structure 

S
S.T
TT
TTS


TTT
S
SS
TTTT

S
Template Predicted Secondary structure 




.
























Template SS confidence 















































































   1........10....... ..20.........30.........40.........50.........60.........70.........
 
   65....70.........80......... 90.........100.
Predicted Secondary structure  ..........







.








Query SS confidence  . . . . . . . . . .
























.











Query Sequence  . . . . . . . . . . DVKLVVVCTHADSHFEYAKRALEAG. KNVLVEKPFTPT
Query Conservation  ..........  
 
 
 

   
      

  
.
 
  


   
Alig confidence  ..........
























.











Template Conservation   
  
 
    





 

       
   
  


 




     
Template Sequence  EPTAIPWGQAGVHYICESTGIFLTKEKAQAHLTNGAKKVIMSAPPKDD
Template Known Secondary structure  SGGG

T


SSS

SGGGGSSS

SS

SSS
Template Predicted Secondary structure 

























Template SS confidence 















































   80.........90.........100.........110.........120.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions