Job Description P46853 Confidence 99.41% Date Wed Jan 25 15:20:56 GMT 2012 Rank 72 Aligned Residues 110 % Identity 21% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																													.
Query SS confidence																								.																													.
Query Sequence		V	I	N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	.	N	R	K	D	S	W	H	V	A	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	.	H	F	T	S	D	L	D	E	V	L	N	D	P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	F
Query Conservation																								.																													.
Alig confidence																	.							.																													.
Template Conservation																	.
Template Sequence		T	T	N	V	M	L	V	G	C	G	N	I	G	R	A	.	L	L	H	Y	R	F	H	D	R	N	K	M	Q	I	S	M	A	F	D	L	D	S	N	D	L	V	G	K	T	T	E	D	G	I	P	V	Y	G	I	S	T	I	N	D	H	L	I	D	S	D	I	E	T	A	I	L	T	V	P	S	T	E	A	Q
Template Known Secondary structure											S						.			T	S		G	G	G	T	S	S										T	T	S	T	T	T	T	S	B		T	T	S		B				G	G	G					T	S	S	S									S		G	G	G
Template Predicted Secondary structure																	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.
Predicted Secondary structure												.																.	.	.	.	.	.	.	.	.
Query SS confidence												.																.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	A	K	R	A	L	E	A	G	.	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	.	.	.	.	.	.	.	.	.	A	K	E	L	F	A	L	A
Query Conservation												.																.	.	.	.	.	.	.	.	.
Alig confidence												.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	A	D	I	L	V	K	A	G	I	K	G	I	L	S	F	S	P	V	H	L	T	L	P	K	D	I	I	V	Q	Y	V	D	L	T	S	E	L	Q	T	L	L
Template Known Secondary structure										T	T								S	S	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions