Job Description P46853 Confidence 98.44% Date Wed Jan 25 15:20:56 GMT 2012 Rank 104 Aligned Residues 147 % Identity 16% Template c3ingA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase (np_394635.1) from2 thermoplasma acidophilum at 1.95 a resolution Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.													.	.	.	.	.	.	.	.	.																	.
Query SS confidence																								.	.	.	.													.	.	.	.	.	.	.	.	.																	.
Query Sequence		V	I	N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	.	.	.	.	N	R	K	D	S	W	H	V	A	H	I	F	.	.	.	.	.	.	.	.	.	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	.	H	F	T	S	D	L	D	E	V	L	N	D	P	D	V	K
Query Conservation																								.	.	.	.													.	.	.	.	.	.	.	.	.																	.
Alig confidence																		.						.	.	.	.													.	.	.	.	.	.	.	.	.																	.
Template Conservation																		.
Template Sequence		E	I	R	I	I	L	X	G	T	G	N	V	G	L	N	V	.	L	R	I	I	D	A	S	N	R	R	R	F	S	I	K	V	V	G	V	S	D	S	R	S	Y	A	S	G	R	N	L	D	I	S	S	I	I	S	N	K	E	K	T	G	R	I	S	D	R	A	F	S	G	P	E	D	L	X	G	E	A	A	D
Template Known Secondary structure											S							.																						S	S	B					S	S														S		S		S	S	B			S	G	G	G	G	T	T	S			S
Template Predicted Secondary structure																		.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		68	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure											.	.	.	.																			.																											.
Query SS confidence											.	.	.	.																			.																											.
Query Sequence		L	V	V	V	C	T	H	A	D	.	.	.	.	S	H	F	E	Y	A	K	R	A	L	E	A	G	K	N	V	L	V	.	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	.	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K	K	A	I	E	S	G
Query Conservation											.	.	.	.																			.																											.
Alig confidence											.	.	.	.																			.							.	.																			.																			.
Template Conservation																																								.	.																																						.
Template Sequence		L	L	V	D	C	T	P	A	S	R	D	G	V	R	E	Y	S	L	Y	R	X	A	F	E	S	G	X	N	V	V	T	A	N	K	S	G	L	A	.	.	N	K	W	H	D	I	X	D	S	A	N	Q	N	S	K	Y	I	R	Y	E	A	T	V	A	G	G	V	P	L	F	S	V	L	D	Y	S	I	.	L	P
Template Known Secondary structure											S	S	S													T	T													.	.														T						G	G	G	S	S	T	T	S									T		.	T	T
Template Predicted Secondary structure																																								.	.																																						.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160
		142	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	E	I	V	E	V	E	S	H	F	D
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		S	.	.	K	V	K	R	F	R	G	I	V	S
Template Known Secondary structure			.	.
Template Predicted Secondary structure			.	.
Template SS confidence
		161			.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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