Job Description P46853 Confidence 100.00% Date Wed Jan 25 15:20:56 GMT 2012 Rank 6 Aligned Residues 331 % Identity 35% Template c3fhlC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from bacteroides2 fragilis nctc 9343 Resolution 1.93 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	H	F	T	S	D	L	D	E	V	L	N	D	P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	F	E	Y
Query Conservation
Alig confidence																																											.	.	.
Template Conservation																																											.	.	.
Template Sequence		I	I	K	T	G	L	A	A	F	G	M	S	G	Q	V	F	H	A	P	F	I	S	T	N	P	H	F	E	L	Y	K	I	V	E	R	S	K	E	L	S	K	.	.	.	E	R	Y	P	Q	A	S	I	V	R	S	F	K	E	L	T	E	D	P	E	I	D	L	I	V	V	N	T	P	D	N	T	H	Y	E	Y
Template Known Secondary structure								S			S							T								T	T									S	S			G	G	G	.	.	.	T	T		T	T	S				S		S					T		T	T								S		G	G	G
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K	K	A	I	E	S	G	K	L	G	E	I	V	E	V	E	S	H	F	D	Y	Y	R	P	V	A	E
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		A	G	M	A	L	E	A	G	K	N	V	V	V	E	K	P	F	T	S	T	T	K	Q	G	E	E	L	I	A	L	A	K	K	K	G	L	M	L	S	V	Y	Q	N	R	R	W	D	A	D	F	L	T	V	R	D	I	L	A	K	S	L	L	G	R	L	V	E	Y	E	S	T	F	A	R	Y	R	N	.	.	.
Template Known Secondary structure								T	T							S	S			S	S															T								G	G	G	G													T	T	T	T	S	S											B			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		T	K	P	G	L	P	Q	D	G	A	F	Y	G	L	G	V	H	T	M	D	Q	I	I	S	L	F	G	R	P	D	H	V	A	Y	D	I	R	S	L	R	N	K	A	N	P	D	D	T	F	E	A	Q	L	F	Y	G	D	.	.	.	.	L	K	A	I	V	K	T	S	H	L	V	K	I	D	Y	P	K	F	I
Query Conservation																																																											.	.	.	.
Alig confidence		.	.	.	.	.																																																					.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	F	I	G	G	L	T	Y	N	L	G	S	H	L	I	D	Q	A	I	Q	L	F	G	M	P	E	A	V	F	A	D	L	G	I	L	R	E	G	G	K	V	D	D	Y	F	I	I	H	L	L	H	P	S	L	A	P	N	V	K	I	T	L	K	A	S	Y	L	M	R	E	A	E	P	R	F	A
Template Known Secondary structure		.	.	.	.	.									T																										S	T	T			S												T	T		T	T	S								S	B		S	S				S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		V	H	G	K	K	G	S	F	I	K	Y	G	I	D	Q	Q	E	T	S	L	K	A	N	I	M	P	G	E	P	G	F	A	A	D	D	S	V	G	V	.	L	E	Y	V	N	D	E	G	V	T	V	R	E	E	M	K	P	E	M	G	D	Y	G	R	V	Y	D	A	L	Y	Q	T	I	T	H	G	A	P	N	Y
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		L	H	G	T	L	G	S	Y	V	K	Y	G	V	D	K	Q	E	A	A	L	L	A	G	E	I	P	E	R	P	N	W	G	E	E	S	E	Q	E	W	G	L	L	H	T	E	I	N	G	K	E	I	C	R	K	Y	P	G	I	A	G	N	Y	G	G	F	Y	Q	N	I	Y	E	H	L	C	L	G	Q	P	L	E
Template Known Secondary structure					S	S							S			S							T	T			T	T	S	T	T	T	T				T	T	T	S								T	T														T	T																	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		V	K	E	S	E	V	L	T	N	L	E	I	L	E	R	G	F	E	Q	A	S	P	S	T	.	V	T	L
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		T	H	A	Q	D	I	L	N	V	I	R	I	I	E	A	A	Y	Q	S	H	R	E	N	K	I	V	N	L
Template Known Secondary structure			B																					T	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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