Job Description P46853 Confidence 100.00% Date Wed Jan 25 15:20:56 GMT 2012 Rank 10 Aligned Residues 337 % Identity 24% Template c3e18A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of nad-binding protein from listeria innocua Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	H	F	T	S	D	L	D	E	V	L	N	D	P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	F	E	Y
Query Conservation
Alig confidence																	.																														.	.
Template Conservation																	.																														.	.
Template Sequence		K	Y	Q	L	V	I	V	G	Y	G	G	M	G	S	Y	.	H	V	T	L	A	S	A	A	D	N	L	E	V	H	G	V	F	D	I	L	A	E	K	R	E	A	A	A	Q	.	.	K	G	L	K	I	Y	E	S	Y	E	A	V	L	A	D	E	K	V	D	A	V	L	I	A	T	P	N	D	S	H	K	E	L
Template Known Secondary structure											S						.							T	S	T	T									S	S									T	.	.	T	T			B		S									T	T								S		G	G	G
Template Predicted Secondary structure																	.																														.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K	K	A	I	E	S	G	K	L	G	E	I	V	E	V	E	S	H	F	D	Y	Y	R	P	.	.	V
Query Conservation																																																																															.	.
Alig confidence																																																																															.	.
Template Conservation
Template Sequence		A	I	S	A	L	E	A	G	K	H	V	V	C	E	K	P	V	T	M	T	S	E	D	L	L	A	I	M	D	V	A	K	R	V	N	K	H	F	M	V	H	Q	N	R	R	W	D	E	D	F	L	I	I	K	E	M	F	E	Q	K	T	I	G	E	M	F	H	L	E	S	R	V	H	G	A	N	G	I	P	G
Template Known Secondary structure								T	T							S	S			S	S															T								G	G	G	G														T	T	T	S	S											S	S		S		S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		A	E	T	K	P	G	L	P	Q	D	G	A	F	Y	G	L	G	V	H	T	M	D	Q	I	I	S	L	F	G	R	P	D	H	V	A	Y	D	I	R	S	L	R	N	K	A	N	P	D	D	T	F	E	A	Q	L	F	Y	.	G	D	L	K	A	I	V	K	T	S	H	L	V	K	I	D	Y	P	K	F	I	V
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		D	W	R	H	L	K	A	H	G	G	G	M	V	L	D	W	G	V	H	L	L	D	Q	L	L	F	L	V	D	S	N	V	K	S	V	S	A	N	L	S	F	A	L	G	D	E	V	D	D	G	F	V	T	F	I	T	F	E	N	G	I	T	A	Q	I	E	V	G	T	T	N	F	I	K	L	P	R	W	Y	V
Template Known Secondary structure		S	G	G	G		G	G	G	T		S					T														S												T	T			S	S		S									T	T	S									S	S		S	S				S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		H	G	K	K	G	S	F	I	K	Y	G	I	D	Q	Q	E	T	S	L	K	A	N	I	M	P	G	E	P	G	F	A	A	D	D	S	V	G	V	L	E	Y	V	N	.	.	.	D	E	G	V	T	V	R	E	E	M	K	P	E	M	G	D	Y	G	R	V	Y	D	A	L	Y	Q	T	I	T	H	G	A	P	N
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.
Template Conservation
Template Sequence		K	G	T	E	G	T	G	I	I	H	D	W	D	L	S	G	E	I	V	K	P	T	A	L	A	K	T	S	E	P	T	P	I	K	A	G	Q	G	L	T	K	T	M	A	P	P	S	E	E	A	T	N	T	L	S	L	P	A	P	A	K	L	A	P	S	F	Y	N	N	F	V	D	V	L	N	N	T	S	E	P
Template Known Secondary structure				T	T							S	T	T										T	T	T	T	T									T	T				S	T	T	S				G	G	G														S											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		Y	V	K	E	S	E	V	L	T	N	L	E	I	L	E	R	G	F	E	Q	A	S	P	S	T	.	V
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		I	V	Q	N	E	E	V	Y	Q	V	L	K	L	I	E	A	I	F	E	A	A	E	T	N	R	T	V
Template Known Secondary structure		S	S																						T	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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