Job Description P46853 Confidence 100.00% Date Wed Jan 25 15:20:56 GMT 2012 Rank 23 Aligned Residues 332 % Identity 18% Template c3dtyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of an oxidoreductase from pseudomonas2 syringae Resolution 2.04 Å

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		3	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.
Predicted Secondary structure											.	.	.																								.																			.	.											.	.	.	.	.
Query SS confidence											.	.	.																								.																			.	.											.	.	.	.	.
Query Sequence		I	N	C	A	F	I	G	F	G	.	.	.	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	.	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	H	.	.	F	T	S	D	L	D	E	V	L	N	.	.	.	.	.	D	P	D	V	K	L	V	V	V
Query Conservation											.	.	.																								.																			.	.											.	.	.	.	.
Alig confidence											.	.	.						.																		.																			.	.											.	.	.	.	.
Template Conservation																			.
Template Sequence		I	R	W	A	X	V	G	G	G	S	Q	S	Q	I	G	Y	I	.	H	R	C	A	A	L	R	D	N	T	F	V	L	V	A	G	A	F	D	I	D	P	I	R	G	S	A	F	G	E	Q	L	G	V	D	S	E	R	C	Y	A	D	Y	L	S	X	F	E	Q	E	A	R	R	A	D	G	I	Q	A	V	S	I
Template Known Secondary structure											T	T		S	S				.							G	G	G	S										S	S											T	T			G	G	G	B		S	S									T	T		T	T			S
Template Predicted Secondary structure																			.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	H	A	D	S	H	F	E	Y	A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K	K	A	I	E	S	G	K	L	G	E	I	V	E	V	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	P	N	G	T	H	Y	S	I	T	K	A	A	L	E	A	G	L	H	V	V	C	E	K	P	L	C	F	T	V	E	Q	A	E	N	L	R	E	L	S	H	K	H	N	R	I	V	G	V	T	Y	G	Y	A	G	H	Q	L	I	E	Q	A	R	E	X	I	A	A	G	E	L	G	D	V	R	X	V	H	X
Template Known Secondary structure			S		G	G	G											T	T							S		S		S															T	T								G	G	G	G	S												T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.															.															.
Query SS confidence																																							.	.															.															.
Query Sequence		H	F	D	Y	Y	R	P	V	A	E	T	K	P	G	L	P	Q	D	G	A	F	Y	G	L	G	V	H	T	M	D	Q	I	I	S	L	F	G	.	.	R	P	D	H	V	A	Y	D	I	R	S	L	R	N	.	K	A	N	P	D	D	T	F	E	A	Q	L	F	Y	.	G	D	L	K	A	I	V	K	T	S	H
Query Conservation																																							.	.															.															.
Alig confidence					.	.	.	.	.	.																													.	.															.															.
Template Conservation					.	.	.	.	.	.
Template Sequence		Q	F	A	.	.	.	.	.	.	H	G	F	H	S	A	G	P	S	Y	V	L	G	D	V	G	T	H	P	L	Y	L	S	E	V	X	L	P	D	L	K	I	K	R	L	X	C	S	R	Q	S	F	V	A	S	R	A	P	L	E	D	N	A	Y	T	L	X	E	Y	E	G	G	A	X	G	X	V	W	S	S	A
Template Known Secondary structure					.	.	.	.	.	.			T	T						S					T	T												T	T													S	S	G	G	G	T	T	S		S									T	T	S									S
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		171	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		228	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		L	V	K	I	D	Y	P	.	.	K	F	I	V	H	G	K	K	G	S	F	I	K	Y	G	I	D	Q	Q	E	T	S	L	K	A	N	I	M	P	G	E	P	G	F	A	A	D	D	S	V	G	V	L	E	Y	V	N	D	E	G	V	T	V	R	E	E	M	K	P	E	M	G	D	Y	G	R	V	Y	D	A	L
Query Conservation									.	.
Alig confidence									.	.																				.	.
Template Conservation																														.	.
Template Sequence		V	N	A	G	S	X	H	G	Q	K	I	R	V	I	G	S	R	A	S	L	E	W	W	D	E	R	P	N	.	.	Q	L	S	F	E	V	Q	G	Q	P	A	Q	I	L	E	R	G	X	G	Y	L	H	P	N	A	L	I	D	D	R	I	G	G	G	H	P	E	G	L	F	E	A	W	A	N	L	Y	Y	R	F
Template Known Secondary structure				T	T		S										S	S							T	T	S	T	T	.	.							T	T	S							T	T		T	T	S		G	G	G	T	T	T			S		T	T	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		306	.	.										.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																																	.	.
Query Sequence		Y	Q	T	.	.	.	.	.	.	.	.	.	I	T	H	G	A	P	N	Y	V	K	E	S	E	V	L	T	N	L	E	I	L	E	R	G	F	E	Q	A	S	P	S	T	.	.	V	T	L
Query Conservation					.	.	.	.	.	.	.	.	.																																	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation
Template Sequence		A	L	A	X	D	A	T	D	R	S	D	T	Q	A	L	S	A	V	R	Y	P	G	I	D	A	G	V	E	G	V	R	W	V	E	R	C	V	L	S	A	D	N	D	S	I	W	V	A	Y
Template Known Secondary structure										T	T							T																									T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions